Gene Tmz1t_2297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2297 
Symbol 
ID7083729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2583669 
End bp2584277 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content72% 
IMG OID643699316 
ProductLexA repressor 
Protein accessionYP_002355932 
Protein GI217970698 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0763769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCC GTAGCGAAAA CCTCACCGCG CGCCAGCAGG AAATCCTCGA TTTCATCCGC 
TCCACCGTCG AGTCCGAAGG CCGCCCGCCC ACCCGCGCCG AGGTGTGCAC CGCCTTCGGC
TTCCGCTCGC CCAACGCCGC CGAGACCCAC CTGCGCGCGC TCGCCGCCAA GGGCGCGATC
CTGCTCGAGG AGGGGCGCGC GCGCGGCATC CGCCTGGCCG AGGCGCTCGG CCTGCCCCTG
GTCGGCCGCG TCGCCGCGGG CAGCCCCATC CTCGCCGCCG AACACGTCGA GGCGCGCTAT
CAGCTCGACC CCGCGCTGTT CTCGCCCAGG GCCGACTACC TGCTGCGCGT GCGCGGCATG
AGCATGCGCG ACGCCGGCAT CCTCGACGGC GACCTCATCG CGGTGCATCG CAACAGCGAG
GCGCGCAACG GCCAGATCGT GGTCGCCCGG GTGGACGACG ACGTCACCGT CAAGACCCTG
CAACGCAAGG GCCCGGTGGT CGAGCTCCTC CCCGCCAACC CGGACTACAC CCCGATCGTC
GTGGACACCC GCCGCGAGCC GCTGGTCATC GAAGGCGTCA TGGTGGGGCT GATCCGCAAG
GACCACTGA
 
Protein sequence
MTARSENLTA RQQEILDFIR STVESEGRPP TRAEVCTAFG FRSPNAAETH LRALAAKGAI 
LLEEGRARGI RLAEALGLPL VGRVAAGSPI LAAEHVEARY QLDPALFSPR ADYLLRVRGM
SMRDAGILDG DLIAVHRNSE ARNGQIVVAR VDDDVTVKTL QRKGPVVELL PANPDYTPIV
VDTRREPLVI EGVMVGLIRK DH