Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_2292 |
Symbol | |
ID | 7083724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 2577598 |
End bp | 2578974 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643699311 |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_002355927 |
Protein GI | 217970693 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.376038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCTCTT CCGCTTCTTG TGCCGCCCAG CCCCGCGGCG GCCGCAGGCA TGGCCCGCTG CTGGCCGTCT GCGCCTGCGC CCTCGCCCTT GCCGCCCTCG CCTCTCCCGC GTCCGCCCGT GACGTGACGG CGGCCCCGGC CACCCTCACC GCCAGCGACA CCGCCGCTAG CGCCGCGGTA GCGACGTCCG CGCCCGAGAC GGCGCGCGTG CTCACGCTCG ATCTCACCCG CGACGCCAAC GACATATGGG ATCGCATCCG CCGCGGCTTC GGCATGCCCG ACCTCGACAG CCAGCGGGTG ATGGACCAGC AGAGCTTCTA CCTCAACCGC CCGCGCTTCC TCAAGCAGGT CTTCGAGCGC GGCGGGCGCT ATCTCTACTA CATCGTCGAC GAACTCGAGC GCCGTGGCAT GCCGACCGAG CTCGCGCTGC TGCCGATGGT CGAGAGCAGC TACAACCCGA TGGCCTACTC GCGCGCGCAC GCTTCCGGCC TGTGGCAGTT CATCCCCTCG ACCGGCAAGC ACTACAACCT CACCCAGGAC CACTGGGTGG ACGAGCGCCG CGACGTGATC GCCTCGACCA ACGCCGCGCT CGACTACCTG CAGCGCATCT ACGAGATGCA CGGCGACTGG CACCTCGCGC TCGCCTCCTA CAACTGGGGC GAAGGCGCGG TGCAGCGCGC GCTCAAGCGC AACGCCGAGG ACGGCCTGCC GCTCGAATAC GAGCACCTGC GCATGCCCGA CGAGACGCGG AACTACGTGC CCAAGCTGCA GGCGATCAAG AACATCGTCG CCGAGCCCGA GCTCTTCCAC TTCGAGTTGC CCTACGTCGC CAACGAGCTG CACTTCGTCA GCGTCGAGGC ACCGATCGGG GTCGACCTCG CCACCGCGGC GAAGCTCTCC GGCATGCCGC TGGACGAGTT CCTCGCCCTC AACCCGGGCT TCAACCGCCC CGCGGTGACC ACGCCCGGGC AGATCTTCAT CGTGCCCACC GACCGCGCCG AGCAGCTGCA GCAAGGCCTC GCCGAGCTCG ACGAGGAGGA CGGCGAATGG CGGATGCACG TGATGGCCGC GGGCGAGACC CTCGAGGCGG TCGCCGCCCG CCATGGCCTG AGCTCGGCCG AGCTGCGCAG GCTCAACGGC CTCGGCCCCG GCAGCCAGCC GGGCGAAGGC CATTCGCTGC TGGTGCCCGA CGGCATCGAC CCGGACGGTG CGCTCGAGGT GACCAGCCTG CTCCCGTTCG CCGCCACCGC CGCCCGCCAA CCGGGCCTCA AGCTCAACAC CAGCCAGGCC CGCAGCGGCG AGCCTCACCT CAAGTCGCCC AAGGCCAGGC AACGCCCGGG CGAGAAGCGC AGCACCAAGC GCAGCAAGAA GCGCTGA
|
Protein sequence | MTSSASCAAQ PRGGRRHGPL LAVCACALAL AALASPASAR DVTAAPATLT ASDTAASAAV ATSAPETARV LTLDLTRDAN DIWDRIRRGF GMPDLDSQRV MDQQSFYLNR PRFLKQVFER GGRYLYYIVD ELERRGMPTE LALLPMVESS YNPMAYSRAH ASGLWQFIPS TGKHYNLTQD HWVDERRDVI ASTNAALDYL QRIYEMHGDW HLALASYNWG EGAVQRALKR NAEDGLPLEY EHLRMPDETR NYVPKLQAIK NIVAEPELFH FELPYVANEL HFVSVEAPIG VDLATAAKLS GMPLDEFLAL NPGFNRPAVT TPGQIFIVPT DRAEQLQQGL AELDEEDGEW RMHVMAAGET LEAVAARHGL SSAELRRLNG LGPGSQPGEG HSLLVPDGID PDGALEVTSL LPFAATAARQ PGLKLNTSQA RSGEPHLKSP KARQRPGEKR STKRSKKR
|
| |