| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2280 |
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| Symbol | |
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| ID | 7083712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 2565863 |
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| End bp | 2568067 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643699299 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_002355915 |
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| Protein GI | 217970681 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0122723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTATCCG TCACCCACGC CATCTCCCAG GGCGACACCG CCCCCCCGAT CGATCTGCTC
GCGGCCGGCC TGGAGCCGAC CGAACGCGAG CACATCGAAG CCGCGCTCGA ATGGATCGCC
GACCTCTACG AGGGCAAGGT GCTCGGCACC GGCGAGCCGA CCTGGACGCA CGCGATCGGT
GCCGCGTTGA TCGCGGCCTC GCTGCGTTTG GACGCCGAGA CGCGCGTGGC CGCGCTGTTG
TTCGCAGCCT GGGAGGAACT CGAGGCCCCC GCCGAGGAGA TCGAGGCGCG CTTCGGTCCG
GCGATCACCG CGCTGGTGCG CGGCCTGCAC AAGCTCAACG GCCTGCGCGT GCTCACCCGC
CTCACCACCA GCGCGAGCGC GCCCGAGATC CGCGCGCAGA CCGAAGTCCT GCGCAAGATG
CTGCTGGCGA TGGTCGAGGA TATCCGCGTC GTGCTGGTGC GGCTGGCCTC GCGCACCCAG
ACCCTGCGCT TCTACACCGA CCTGCCGGGC GAGGCCCGCG TCGAGGTCGC GCGCGAGAGC
CTGGACATCT ACGCGCCGCT CGCCAACCGG CTGGGGGTGT GGCAGATCAA GTGGGAGCTG
GAAGATCTCT CCTTCCGCTT CATCGAGCCC GACACCTACA AGCGCATCGC GAAGATGCTC
GACGAGCGTC GGGTGGAGCG CGAGCAGTTC ATCCGCGACT CCATCGAGCG CCTGAAGAGC
GAGCTCGCCG CGGTCGGAAT CGAGGCCGAG ATCACCGGCC GCGCCAAGCA CATCTACAGC
ATCTACAACA AGATGCGCAA GAAGCGGCTC GACTTCTCGC AGGTCTTCGA CATCCGCGCG
CTGCGCGTGC TGGTGCCCGA GATCAAGGAC TGCTACACGG TGCTGGGTAT CGTGCACCAG
ATGTGGCAGC CGATCGCGAA GGAGTTCGAC GACTACATCA CCAAGCCCAA GGGCAACAAC
TACCAGTCGC TGCACACCGC CGTGCTGGCG GGCGACGGGC GCGCGCTCGA GGTGCAGATC
CGCACCTTCG ACATGCACAA GCACGCCGAG CTCGGCGTGG CCGCGCACTG GCGCTACAAG
GAAGGCGCCA GGCAGGGCGG CGACTACGAC GAGAAGATCG CGCTGCTGCG CAGCCTGTTG
TCTTGGCGCG ACGAGGTTAC CGATGCGGCG CACTGGGTGG AGCAGCTCAA GCGCGCCTCG
CTCGACGACA CGCTCTACGT GCTGACGCCG CAGGGCAGGG TGGTCGATCT GCCGCGCGGC
GCCACGCCGG TCGACTTCGC CTACCGCCTG CACACCGACG TCGGCCACCA CTGCCGCGGC
GCCAAGGTCG ACGGCCACCT CATACCCCTG AACACCCAGC TGGAGAGCGG GCAGACGGTG
GAGATCGTCA CCGCCAAGGA GGGCGGCCCC TCGCGCGACT GGCTGGACAC GCGCCAGGGC
TACGTCGCCA CCTCGCGTGC GCGCAGCAAG ATCAAGCAGT ACTTCGCACA ACTGGACGAG
GAGGAGATCC TCTCGCGCGG GCGCAGCTTC GTCACCAAGG AGATGCAGCG CGACGGCCAC
GGCCAGGCCA ACATCGACGG CCTGGCCGAG CGCCTCGGCT TCAAGAACGC CGAGGCGCTG
TACCTGGCCG CCGGGCGTGG CGAGGTGGGC CCGCGCGCGA TGCAGACCGC GCTGCGCGAG
GGCAGCGCCC CCGAGCCGGC GGCGGAGGCC GAACCCGAGT TCGTGGTCAG CCGCAGCCGC
TCGGGCGACA ATCAGGACAA GATCCTGATC GTCGGTGTGG GCAAGCTGAT GACCTCGCTG
TCGCGCTGCT GCAAGCCCGC CCCGCCGGAT GCGATCGAGG GCTTCGTGAC GCGCGGCCGC
GGCATCTCGA TCCACCGCGT CGATTGCGCC GACTTCCAGG ACCTCGCGCG CAAGCACCCC
GAGCGCGTGA TCCCGGCCGA GTGGGGCGAG AAGGCGCACG ACACCCGCAA CGCCCTCTAC
CAGGTCGACA TCAACGTCCA GGCGAGCGAC CGCCAAGGCC TGCTGCGCGA CATCTCCGAG
GTGCTGTCGC GCGAGAAGCT CAACGTCATC GCGGTCAACA CGCTCACCAA GAAGGGCACC
GCCTACATGC GCTTCACCAT GGAGGTGGGC GGCATCAAGC AGGTGCAGCG CGCGATCACG
CTGGTGCGCG AGGTGCCCGG CGTGATCGAC GCTCAGCGCA AGTGA
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| Protein sequence | MVSVTHAISQ GDTAPPIDLL AAGLEPTERE HIEAALEWIA DLYEGKVLGT GEPTWTHAIG
AALIAASLRL DAETRVAALL FAAWEELEAP AEEIEARFGP AITALVRGLH KLNGLRVLTR
LTTSASAPEI RAQTEVLRKM LLAMVEDIRV VLVRLASRTQ TLRFYTDLPG EARVEVARES
LDIYAPLANR LGVWQIKWEL EDLSFRFIEP DTYKRIAKML DERRVEREQF IRDSIERLKS
ELAAVGIEAE ITGRAKHIYS IYNKMRKKRL DFSQVFDIRA LRVLVPEIKD CYTVLGIVHQ
MWQPIAKEFD DYITKPKGNN YQSLHTAVLA GDGRALEVQI RTFDMHKHAE LGVAAHWRYK
EGARQGGDYD EKIALLRSLL SWRDEVTDAA HWVEQLKRAS LDDTLYVLTP QGRVVDLPRG
ATPVDFAYRL HTDVGHHCRG AKVDGHLIPL NTQLESGQTV EIVTAKEGGP SRDWLDTRQG
YVATSRARSK IKQYFAQLDE EEILSRGRSF VTKEMQRDGH GQANIDGLAE RLGFKNAEAL
YLAAGRGEVG PRAMQTALRE GSAPEPAAEA EPEFVVSRSR SGDNQDKILI VGVGKLMTSL
SRCCKPAPPD AIEGFVTRGR GISIHRVDCA DFQDLARKHP ERVIPAEWGE KAHDTRNALY
QVDINVQASD RQGLLRDISE VLSREKLNVI AVNTLTKKGT AYMRFTMEVG GIKQVQRAIT
LVREVPGVID AQRK
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