| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2277 |
|---|
| Symbol | |
|---|
| ID | 7083709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 2560863 |
|---|
| End bp | 2561978 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643699296 |
|---|
| Product | protein of unknown function DUF140 |
|---|
| Protein accession | YP_002355912 |
|---|
| Protein GI | 217970678 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
|---|
| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGGC GTGTGCTCGA CGAGGTCTTC ACGGCCGGAG CCGAGGGCAT CCGCCTCGCC
GGCGACTGGA CCCTGCGCGG TCTCGACGAG TGCCTCCCGA CGCTGCGCCG GGCGCTGGCC
ACGGTGCCTC CCGACGCGCG CTGGTCGCTG CGCGCGGTGC GCCGCATGGA CAGCTTCGGC
GCCTTGCTGC TGTGGCAGGC CTGGGGCGGA CGCTGGCCTG CGGCGCTCGA GGCCGATGAC
GCCCAGCGCG CCATCATCGG CCGTATCGAG AACGCCTCCG CCCGTGCGCT GCCCGAGCCG
CCGCGCGCTT CCGCGCTCGA CGCGGTGGCG CTGCTCGGCA AGGGCCTGTT CGCATTCGCT
GGCCATCTTT CCGGCTTCGT CGCGCTCCTC GGTCGTCTCG TGCTCGATCT CGGCCACCTG
CTGCACCATC CACGCGACTG GCCGCTGCTG GAGATCTCGG CAAACCTCCA CAAGGTAGGC
GTCAAGGCGA TGCCGGTCTC GGCCCTGGTC GGCTTCCTGA TCGGTGTGGT GCTGTCCTAT
CTGTCCGCGC TGCAGCTGCG CACCTTCGGC GCGGACGCCT TCATCGTCAA CATCCTCGGC
ATGGGCATCA TCCGCGAGCT CGGCCCCGTG CTGGTGTCGG TGCTGGTGGC GGGGCGCTCC
GGTTCGGCGA TGACGGCGCA GCTCGGGGTG ATGCGGGTGA CCGAGGAGAT CGATGCGCTC
GCGGCGATGG GCGTCTCGCG CAGCCTGCGC CTGGTGCTGC CCAAGGTGGT GGCGCTTTCC
CTCGCGATGC CGCTGCTCGT GTTGTGGACC TCGGCGATCG CCCTTTTCGG CGGCTGGGTG
TCGGCCTGGG TGGAGCTCGG CATCGGGCTA CAGTTCTTCC TGCGGGCGCT GCCCGATGCG
GTGCCGGTGG CCAACCTCTA CATCGGGCTC GCCAAGGGGG CGGTGTTCGG TTTCCTGATC
GCGCTCGTGG CCTGCCATTT CGGCTTGCGG GTGAAGCCCG ACACCGAGAG CCTGTCCGCG
AACACCACCG CCTCGGTGGT GGCGGCGATC ACGGTGGTGA TCCTGGTGGA CGCGGTGTTC
GCGATCGCCA CCCGTTCGAT CGGGCTGCCG CTGTGA
|
|---|
| Protein sequence | MAGRVLDEVF TAGAEGIRLA GDWTLRGLDE CLPTLRRALA TVPPDARWSL RAVRRMDSFG
ALLLWQAWGG RWPAALEADD AQRAIIGRIE NASARALPEP PRASALDAVA LLGKGLFAFA
GHLSGFVALL GRLVLDLGHL LHHPRDWPLL EISANLHKVG VKAMPVSALV GFLIGVVLSY
LSALQLRTFG ADAFIVNILG MGIIRELGPV LVSVLVAGRS GSAMTAQLGV MRVTEEIDAL
AAMGVSRSLR LVLPKVVALS LAMPLLVLWT SAIALFGGWV SAWVELGIGL QFFLRALPDA
VPVANLYIGL AKGAVFGFLI ALVACHFGLR VKPDTESLSA NTTASVVAAI TVVILVDAVF
AIATRSIGLP L
|
|---|
| |