Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_2240 |
Symbol | |
ID | 7083672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 2523801 |
End bp | 2524646 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643699259 |
Product | phosphoserine phosphatase SerB |
Protein accession | YP_002355875 |
Protein GI | 217970641 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR00338] phosphoserine phosphatase SerB [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00113806 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACCTCG TCGTGCTGGC CGAGGACGTC GACAGCGTCG CGCTCAAGAA CGTCGCCAAG GTGTCGGAGG CGAGCGCGAT CGAGCAGATC ACCACGCGCT CCTTCCGCCT CGTCGGCGCG AAGCCGGTCG AAGGTCTGGT GGCCGCGTGC GCGGCCGGGG GGCTCGACCA CGTGTGGCTG CCCGAGGGCC GCCAGCTGCG CGATTTCGGC CTCTTCGTGA CCGACATGGA CTCGACCCTG ATCAACATCG AGTGCATCGA CGAGATCGCC GACATGCAGG GCTTCAAACG CGAGGTGGCG GCGATCACGG AGGCGGCGAT GCAGGGCGAG ATCGACTTCC GCGAGTCGCT GACGCGTCGC GTGGCCCTGC TCGCCGGCCT GCCCGAGAGC GCGCTCGCCG AGGTCTTCGA TCACCGCCTG CAGCTCAACC CCGGGGCGGA GCGCCTGCTG CAGGGGTTGC AGCGCGCGGG TATCCGCACG ATGCTGGTGT CGGGCGGCTT CACGTATTTC ACCGAGCGGC TGAAGTCGCG GCTGGGCTTC GACTATGCGT GGGCGAACCA GCTCGAGGTG TATGACGGAA AGCTGACCGG AAAGGTGCTC GGGGACATCG TGGACGGCGA GGCCAAGGCC GCGCACCTGG AGCAGGCGCG CGACGAGTTG GGCCTCAGGC CCGAGCAGGT GATCGCCGCC GGCGACGGCG CCAACGACAT CCCCATGCTG CGCGCGGCCG GCTTCGGTGT CGCCTTCCAC GCCAAGCCGG TGCTGCGCGA CGTCGCCCAC TGCTGCCTCG ACCACACCGG CCTGGACGGC ATCCTCGACC TGTTCGGCCC TGGCGGCGAA AGCTGA
|
Protein sequence | MNLVVLAEDV DSVALKNVAK VSEASAIEQI TTRSFRLVGA KPVEGLVAAC AAGGLDHVWL PEGRQLRDFG LFVTDMDSTL INIECIDEIA DMQGFKREVA AITEAAMQGE IDFRESLTRR VALLAGLPES ALAEVFDHRL QLNPGAERLL QGLQRAGIRT MLVSGGFTYF TERLKSRLGF DYAWANQLEV YDGKLTGKVL GDIVDGEAKA AHLEQARDEL GLRPEQVIAA GDGANDIPML RAAGFGVAFH AKPVLRDVAH CCLDHTGLDG ILDLFGPGGE S
|
| |