Gene Tmz1t_2233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2233 
Symbol 
ID7083665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand+ 
Start bp2516125 
End bp2516841 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content66% 
IMG OID643699253 
ProductCRISPR-associated protein, Cse3 family 
Protein accessionYP_002355869 
Protein GI217970635 
COG category 
COG ID 
TIGRFAM ID[TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTTTGA CGCTTTTACA ATGCCATCCC GACCCGCACC GGCTCGCCGC CTGGGCGACG 
CGCTTCGGAC TGACCGCTGG CGGTGACGAC CTTGGCTACG CGCTGCACAC ACTGCTGGCG 
GCAGCCTTCG GCGACCTCGC GCCCAAGCCC TTCCGACATT TTGGCGATGT GCGCGGCCTG 
TTGGCCTACA GCGGGCAAGG CGCCGACCGT ATCCACACGG CTGCCCAAAT GGCCGCGCCC 
GACGTCCACG CCGTTCTGGG CCTTGAGCGC TTTGCTGCTC GCAGCTTCCC GACCGACTGG 
GCAGCGGGCA GGCGGCTGGG TTTCGAGTTG CGGGTGCGGC CGGTGCTGAG GACGAAAGAT 
GGACGCGAAC GTGACGTTTT CCTCTCCCAG GCCGAGAAAC GTGGCGTAGC GGAGAAAGAG 
CTGTCGCGTG AGGCTGTGTA CTTGGAATGG CTTCAGCGCG AGTTGGCACG CGGCGACGCC 
GCAAACGTCG ACCGCGCACA ACTGGATGGT TTCCGTCTCA CTTCCAGCTT GCGCAAGGGA 
AGCGCAGTCG TTGGCCGGCG CCCCGCTCAG CGTGTAACGG GCCCCGACGC ATTGTTTTCC 
GGCGAACTCA CGGTGCGCGA CCCAGCGGGC TTCGCGGCAC TGATTGCGCG CGGGGTTGGA 
CGCCATCGCG CCTTCGGATT CGGCATGCTG CTTCTGCGGC CACCCTCTGA ATGCTGA
 
Protein sequence
MSLTLLQCHP DPHRLAAWAT RFGLTAGGDD LGYALHTLLA AAFGDLAPKP FRHFGDVRGL 
LAYSGQGADR IHTAAQMAAP DVHAVLGLER FAARSFPTDW AAGRRLGFEL RVRPVLRTKD 
GRERDVFLSQ AEKRGVAEKE LSREAVYLEW LQRELARGDA ANVDRAQLDG FRLTSSLRKG 
SAVVGRRPAQ RVTGPDALFS GELTVRDPAG FAALIARGVG RHRAFGFGML LLRPPSEC