Gene Tmz1t_2232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2232 
Symbol 
ID7083664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2515397 
End bp2516128 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content64% 
IMG OID643699252 
ProductCRISPR-associated protein Cas5 family 
Protein accessionYP_002355868 
Protein GI217970634 
COG category 
COG ID 
TIGRFAM ID[TIGR01868] CRISPR system CASCADE complex protein CasD/Cas5e
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAACC ACCTGCTCAT CCGCCTCGAA GGGCCGTTAA TGGCCTTTGG CGGCGAGACC 
ATCGACAACA TTGGCGTGAT CCGCGACTTC CCGGCGCAGT CGATGCTGAC CGGTCTGATC
GCCAATGCAC TCGGCTGGCG GCGCGAGGAT GCGGGAGCGC ATGACCGACT TCAGGCTCGA
GTCGTGTTCG GGGCAAGACT CGACCGTGCC GGTTCGCGCA TGCGGGAATA TCAGACGGCC
TTGTTAGGGA TGAACGATAG TGGTTGGACG ACTGGTGGGT TACCCGAGGG GCGCGAGCAA
AGTCCGTCAT ATCGGGCTGA CCGAGCCGGC AAAAAGGTGC TGACGTTGCA ACGTTATCGA
GACCACCATA CGGACGCTGC CGTGCTCGTC GCCCTGCGCC TCGAACCAGC CAACGAAACC
CCTACGCTGG ACGCTGTTGC CAACGCTCTG CAGCGCCCAG CGCGCCCACT TTTCCTTGGG
CGCAAGCCCT GTCTGCCAGC TGCGCCGCTG TTTGCAGGCT GGATCGACGC GCCGGACGTA
CTCACTGCGC TACGAGACGC TGTCCCACTG GCTGCCAACG CCCGACCTCG CGTGATGTGG
CCGGCTGGCG AAGGTGAAAT GCCCGGCGCC CGCCAGATTG ACCTGTGCGA TGAACGCAAC
TGGACCAGCG GTGTGCATGG CGGCTGGCGC CCCGTTTGCG AGGGCAACCT GAAGTTGGAG
GAGCGAACGT GA
 
Protein sequence
MANHLLIRLE GPLMAFGGET IDNIGVIRDF PAQSMLTGLI ANALGWRRED AGAHDRLQAR 
VVFGARLDRA GSRMREYQTA LLGMNDSGWT TGGLPEGREQ SPSYRADRAG KKVLTLQRYR
DHHTDAAVLV ALRLEPANET PTLDAVANAL QRPARPLFLG RKPCLPAAPL FAGWIDAPDV
LTALRDAVPL AANARPRVMW PAGEGEMPGA RQIDLCDERN WTSGVHGGWR PVCEGNLKLE
ERT