Gene Tmz1t_2231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2231 
Symbol 
ID7083663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2514211 
End bp2515395 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content62% 
IMG OID643699251 
ProductCRISPR-associated protein, Cse4 family 
Protein accessionYP_002355867 
Protein GI217970633 
COG category 
COG ID 
TIGRFAM ID[TIGR01869] CRISPR system CASCADE complex protein CasC/Cse4 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCTCC CGCGCTTCAT CCAGATCCAC ACCCTGCACA CCTACCCCGC TGCCCTGCTC 
AACCGTGACG ATGCCGGACT CGCAAAACGC CTCCCCTACG GCGGCGCGAT CCGAACGCGC
ATTTCCTCAC AGTGCCTCAA GCGCCACTGG CGCGTCGCCG ACGACGCGTT TTCGCTGGCG
AAACTGGGCG TGCCGATGGC CACGCGCACA CGCTACGTCG CCGAATTGAT TCGCCAACGC
CTTATCGAGC AAGGCATCGA CGAAGCGCGC GCCTACGCTA CCGCCGAGGC CCTGCTTGAG
GCCCTGTTCG GCGAGAAGGC CGACAAGAAG AAGGAAGGCG TCAAGGCACT TCAAACCGGG
CAGGCGGTGC TCTTCGGCAA CGAAGAAATC GCTTACCTTG CGCGCCGCTG CCGAGACATC
ACTGGCGACT TTTCCGATCC AGTCGCGCTG AAGGCAGAGG TGGCGAAGTT CCTCAAAGAG
GAAAAGAAGA ACATCGAGGC GATGAAGCTC GGCAGCGGCC TCGAATCGGC TCTCTTCGGT
CGCATGGTTA CCTCTGACCT GCTTGCCAAC CGCGACGCAT CGGTGTCGGT CGCCCACGCC
TTCACGGTGC ATGAAGCGCA GGTCGAAAAC GACTACTTCA CCGTAGTCGA TGATTTTGCC
CAGGCGGAAG ATGGTGCGGG CTCGGCCGGC ATCTTCGATA CCGAACTCGC CTCGGGGTTG
TACTACGGAT ACGTGGTTAT CGACGTGCCG CAACTCGTTG CAAACCTCGA GGGCATCAAA
GTCGAGGATG TCTTCACGAT CGGGGCCGAC AAGCGTGGTT TGGCCGGCAA GGTCGTCCAA
CATTTGCTGC ACCTTATCGC CACCGTGAGC CCCGGCGCCA AGCGTGGATC CACTGCACCA
TACGACTGGG CAAAGTTCGT CTTGGTCGAG GCCGGTGACT GGCAACCGCG CAGCCTTGCA
GCAGCTTTCC ACGATCCAAT ACCGCTCAAG GGCGACTCTT CGATCCGTGG CCGCGCCGCT
AGCAAACTGG CCAAAGAGAT CGCGGCCTTC GACGCAGCAT ACGGAATGCC TACGGCGCGC
CGGTTCCTGT CGCTGGACGA GTTGGCTGTT CCCGCCGCGG AGCGCGCGAC GCTCTCACAA
CTGGGTGAGT GGATCGCACA AACCGTTCGC GACGGCGCGT GCTGA
 
Protein sequence
MSLPRFIQIH TLHTYPAALL NRDDAGLAKR LPYGGAIRTR ISSQCLKRHW RVADDAFSLA 
KLGVPMATRT RYVAELIRQR LIEQGIDEAR AYATAEALLE ALFGEKADKK KEGVKALQTG
QAVLFGNEEI AYLARRCRDI TGDFSDPVAL KAEVAKFLKE EKKNIEAMKL GSGLESALFG
RMVTSDLLAN RDASVSVAHA FTVHEAQVEN DYFTVVDDFA QAEDGAGSAG IFDTELASGL
YYGYVVIDVP QLVANLEGIK VEDVFTIGAD KRGLAGKVVQ HLLHLIATVS PGAKRGSTAP
YDWAKFVLVE AGDWQPRSLA AAFHDPIPLK GDSSIRGRAA SKLAKEIAAF DAAYGMPTAR
RFLSLDELAV PAAERATLSQ LGEWIAQTVR DGAC