Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_2214 |
Symbol | ispD |
ID | 7085567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 2493531 |
End bp | 2494250 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643699234 |
Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
Protein accession | YP_002355850 |
Protein GI | 217970616 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGCCA TGCAGATCAG CCACCCACGC CACTTCGCCA TCGTGCCCGC CGCAGGCAGC GGCTCGCGCA TGGCCGCCGC GCGTCCCAAG CAGTATCTGT CGCTGCTCGG TCGCCCCCTG ATCCATCATG CGCTTTCGGT GCTGTGCGCC GCGCCTGCGA TCGACGCGGT GTTCGTCGTG CTCTCGGTGG ACGACACGGA GTGGGCAACG CACGACTGGA GCGCGCTCGG CCCCAAGCTG CGCCCGCTCT TCTGCGGTGG CGCCACGCGC GCCGACAGCG TGCTCGGCGG CCTGCGCGCA ATCGCCGGCG AGGCGGCGGC TGGGGACTGG GTGCTGGTGC ACGACGCCGC GCGCCCCTGC CTGGCGCCCT GGCATGTCGA CAAGCTCGTA CGCGAGCTCG CCCACGACGA GGTCGGCGGC TTGCTGGCAG TCCCGGTGGC CGACACCCTC AAGCGTGCCG ACGAGCACCG CCATGTGTGC GAGACCGTGC CGCGCGACAG CCTGTGGCAG GCGCAGACGC CGCAGATGTT CCGCTACGCC ATGCTGCGAC GCGCGCTCGA AGGCGCGCGC GAGGTCACCG ACGAGGCGAG CGCGATCGAG GCCGCCGGCC TGCGTCCGCG CCTGGTGCAG GGCGACGCCA CCAACCTGAA GGTCACCTAT CCGCTCGACC TGCACCTGGC CGAGTGGATC CTCGAGAACC GTGAGGGCCA CAACGCATGA
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Protein sequence | MRAMQISHPR HFAIVPAAGS GSRMAAARPK QYLSLLGRPL IHHALSVLCA APAIDAVFVV LSVDDTEWAT HDWSALGPKL RPLFCGGATR ADSVLGGLRA IAGEAAAGDW VLVHDAARPC LAPWHVDKLV RELAHDEVGG LLAVPVADTL KRADEHRHVC ETVPRDSLWQ AQTPQMFRYA MLRRALEGAR EVTDEASAIE AAGLRPRLVQ GDATNLKVTY PLDLHLAEWI LENREGHNA
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