Gene Tmz1t_2213 details

Gene Information

• Locus tag: Tmz1t_2213
• Symbol: ispF
• ID: 7085566
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: -
• Start bp: 2493040
• End bp: 2493534
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 643699233
• Product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_002355849
• Protein GI: 217970615
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCATCC CCTTTCGCAT CGGCCAGGGC TTCGACGTGC ACGCCCTGGT CCCCGGCCGG 
CCGCTGATCG TCGGCGGCGT CGACATTCCC TTCGGGCATG GACTGCTCGG CCACTCGGAT 
GCCGACGTGC TGTTGCATGC GGTGACGGAC GCGCTGCTCG GCGCCGCCGG CCTGGGCGAT 
ATCGGCCGGC TCTTCCCGGA TACCGACCCG GCCCACGCCG GCGCCGACAG CCGCGTGCTG 
CTGCGCGAGG CCTTCGCGCG CGTGCGCGCA GCGGGCTGGG AGGTCGTGAA CCTCGATGCC 
ACGCTGATCT GCAAGGCGCC GCGCATCCTG CCGCACGCCC CGGCGATGGT GGCCAACCTG 
GCCGCCGACC TGGAGATGGA CGCGACGGCG ATCAACATCA AGGGCAAGAC CACCGAGAAG 
CTCGGCTTCA CCGGACGTGG CGAAGGCATC GCCGCGCAGG TGGTCGCGCT GATCGCGCGC 
GCGGAGCATG GCTGA 

 

Protein sequence

MSIPFRIGQG FDVHALVPGR PLIVGGVDIP FGHGLLGHSD ADVLLHAVTD ALLGAAGLGD 
IGRLFPDTDP AHAGADSRVL LREAFARVRA AGWEVVNLDA TLICKAPRIL PHAPAMVANL 
AADLEMDATA INIKGKTTEK LGFTGRGEGI AAQVVALIAR AEHG