Gene Tmz1t_2201 details

Gene Information

• Locus tag: Tmz1t_2201
• Symbol: hscA
• ID: 7085554
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: -
• Start bp: 2483028
• End bp: 2484896
• Gene Length: 1869 bp
• Protein Length: 622 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 643699221
• Product: chaperone protein HscA
• Protein accession: YP_002355837
• Protein GI: 217970603
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR01991] Fe-S protein assembly chaperone HscA

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.112267
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCTGT TGCAAATCAC CGAACCCGGC ATGTCCACCG AGCCGCACCA GCACCGGCTC 
GCCGTCGGCA TCGACCTCGG GACCACCAAT TCGCTCGTCG CCACCGTGCG CAACGGCATC 
GCGATCTGCC TGCCCGACGA GGCCGGCCGC ACCATGCTGC CCTCGGCCGT GCGCTATCAC 
GCCGATGGCG GCATCGAGGT CGGTCTGGGT GCGCTCAAGG CGCAGGCGGT CGATCCGCGC 
AACACCATCG TCTCGGTCAA GCGCTTCATG GGCCGCGGCC TCAAGGACGT CACCCACATC 
GAGGCGATGC CCTACGACTT CGAGGACAGC CCCGGGATGG TGCGGCTGCG CACGGTGCAG 
GGCGTCAAGA GCCCGGTGGA GGTCTCCGCC GAGATCCTGC GCCGCCTGCG CGAACGCGCC 
GAGGCCAGCC TCGGCGGCGC GCTGGTCGGC GCGGTGATCA CCGTGCCGGC CTACTTCGAC 
GACGCCCAGC GCCAGGCCAC CAAGGACGCG GCGCGCCTGG CCGGGCTCGA CGTGCTGCGC 
CTGCTCAACG AACCGACCGC CGCCGCGGTG GCCTACGGCC TCGACAACGC GGCCGAGGGC 
GTCTACGCGG TGTACGACCT GGGCGGGGGC ACCTTCGACC TCTCCATCCT CAAGCTCTCG 
CGCGGCGTGT TCGAGGTGCT GTCGACCAAC GGCGACGCCG CGCTCGGCGG CGACGACTTC 
GATCATCGCC TGTTCTGCTG GATCCTCGAC CGCGCCAAGA TCTCGCCGCC CTCGCTGGAA 
GACGCGCGCC GCCTGCAGAT GAAGGCGCGC GAGGCCAAGG AGCTGTTGAC GAGCTGTGAC 
GAGGCCCCGG TGCATGTGCG CCTGGCCTCG GGCGAAGAGG TCGACCTCGT GGTGACCCGC 
GAGGAGTTTG CCGAGATGAC CACGCATCTG GTCCAGAAGA CCCTGGCCCC GGTGCGCAAG 
GCCTTGCGCG ACGCCGGCCT CGCGCCCGAC GAGATCAAGG GTGTGGTGAT GGTGGGGGGC 
GCGACCCGCA TGCCCCACGT CCAGCGCGCG GTCGCGAACT ACTTCGGCCA GGAGCCCCTG 
ACCAACCTCG ACCCCGACAA GGTCGTCGCA CTGGGCGCGG CGATGCAGGC AAACGTGCTC 
GCAGGCAACC GCGCCGACCA GGACGACTGG CTGCTGCTCG ACGTCATCCC GCTCTCGCTC 
GGCCTCGAGA CCATGGGCGG CCTGGTCGAG AAGGTCGTGC CGCGCAACGC CACGCTGCCG 
ATCGCGCGCG CGCAGGAATT CACCACCTTC AAGGACGGCC AGACCGCGAT GGCCTTCCAT 
GTCGTGCAGG GCGAGCGCGA GCTCGTCTCC GACTGCCGCT CGCTCGCGCG CTTCGAGCTG 
CGCGGCATTC CCCCCATGGT GGCGGGCGCG GCGCGCATCC GCGTGACCTT CCAGGTCGAT 
GCCGACGGCC TGCTGGCGGT GTCGGCGCGC GAGATGTCCT CGGGCGTCGA GGCCAGCGTG 
CTGGTCAAGC CCTCGTACGG CTTGTCGGAC GACGAGATCG CCGAGATGTT GCGCTCGGGC 
GTGGATCACG CCGGCGACGA CATGGCCGCG CGCGCGCTGC GCGAGCAGCA GGTCGAGGCC 
GACCGTGTCG TCGAAGCCAC CGAGCAGGCG CTCGGCCACG ACGGCCACCT GCTCTCCGCC 
GTCGAGTCCG CCGAAATCCG CAGCGTGATC GCGCGCCTGC GCGAGCTGCG CGCCGGCACC 
GACAACCGTG CCATCAAGGC CGGCATCGAC GCGCTCGCGC GCGCCACCGA CACCTTCGCC 
GCGCGCCGCA TGGACAACAG CATTCGCAGC GCGCTGACCG GCCACAAGGT CGACGAACTC 
CCCATCTGA 

 

Protein sequence

MALLQITEPG MSTEPHQHRL AVGIDLGTTN SLVATVRNGI AICLPDEAGR TMLPSAVRYH 
ADGGIEVGLG ALKAQAVDPR NTIVSVKRFM GRGLKDVTHI EAMPYDFEDS PGMVRLRTVQ 
GVKSPVEVSA EILRRLRERA EASLGGALVG AVITVPAYFD DAQRQATKDA ARLAGLDVLR 
LLNEPTAAAV AYGLDNAAEG VYAVYDLGGG TFDLSILKLS RGVFEVLSTN GDAALGGDDF 
DHRLFCWILD RAKISPPSLE DARRLQMKAR EAKELLTSCD EAPVHVRLAS GEEVDLVVTR 
EEFAEMTTHL VQKTLAPVRK ALRDAGLAPD EIKGVVMVGG ATRMPHVQRA VANYFGQEPL 
TNLDPDKVVA LGAAMQANVL AGNRADQDDW LLLDVIPLSL GLETMGGLVE KVVPRNATLP 
IARAQEFTTF KDGQTAMAFH VVQGERELVS DCRSLARFEL RGIPPMVAGA ARIRVTFQVD 
ADGLLAVSAR EMSSGVEASV LVKPSYGLSD DEIAEMLRSG VDHAGDDMAA RALREQQVEA 
DRVVEATEQA LGHDGHLLSA VESAEIRSVI ARLRELRAGT DNRAIKAGID ALARATDTFA 
ARRMDNSIRS ALTGHKVDEL PI