Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_2196 |
Symbol | |
ID | 7085549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 2479687 |
End bp | 2480844 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643699216 |
Product | succinyl-diaminopimelate desuccinylase |
Protein accession | YP_002355832 |
Protein GI | 217970598 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGACCA GCCCCTCCAG CTCCTCCACC CTCGCGCTCG CCTGCGAGCT CATCGCCCGC CCCTCCGTCA CGCCGGAGGA CGCCGGCTGC CTCGAACTCG TCGCCTCCCG CCTTGCCCCG CTCGGCTTCC GCCTCGAACG CATCGACAGC GGCGGCGTCT GCAACCTGTG GGCGCGGCGC GGCATTGCGG CGCCCGTGCT GTGCTTCGCC GGCCACACCG ACGTCGTGCC GCCCGGGCCG GACAGCGCGT GGTCCTCGCC GCCCTTCGCA CCTACGATCC GCGACGGCGT GCTGTACGGT CGCGGTGCGG CCGACATGAA GTCCTCGCTT GCCGCCTTCG TCACCGCCAT CGAACGCTTC GTCGCCGCCC ATCCCGACCA CGCTGGCAGC ATCGCGCTGC TGCTGACGTC GGACGAGGAA GGCATCGCCA CCCATGGCAC GGTCAAGGTG GTCGAGGCCT TGGCCGCGCG CGGCGAGCGC CTCGACTACT GCGTGGTGGG CGAGCCGACC TCGGTGCAGA CGCTCGGCGA CATGATCAAG AACGGCCGCC GCGGCTCGCT GTCGGGTACG CTGCGGGTCA AGGGCCAGCA GGGCCACGTC GCCTACCCGC AGCTCGCCCG CAACCCGATC CACCTTTTCG CGCCGGCGCT CGCCGAGCTC GCGGCGAGCG ACTGGGACCA GGGCAACGAG TTCTTCCCGC CCACGACCTG GCAGGTGTCG AACATCCACG CCGGCACCGG CGCCAACAAC GTGATCCCCG GTGTGTGCGA GGTGATGTTC AATTTCCGCT TCGGCTCGGT GTCGAGCGCG GACGAGCTGA AAAGCCGCAC TTGCGAGGTG CTCGACCGCC ACGGGCTGGA CTACGAGATC GACTGGCACC TGTCCGGCAA GCCCTTCATC ACCGGGCGCG GCAGGCTGGT CGGCGCGCTG TCGGCCGCGA TCCGGGAGAC GCTGGGAGTC GAGACAGAAC TGTCGACGAC CGGCGGCACC TCCGACGGCC GCTTCATCGC CGAGATCTGC GCCGAGGTAG TCGAGTTCGG CCCGGTCAAT GCTTCGATCC ACAAGATCGA CGAGCACATC GCAGCCGATG CGATCGAACC CTTGTCCGTG GTTTATGAGC GCACCTTGAC CGCCCTGCTC GTCCCCGGCC GCCTGTAG
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Protein sequence | MQTSPSSSST LALACELIAR PSVTPEDAGC LELVASRLAP LGFRLERIDS GGVCNLWARR GIAAPVLCFA GHTDVVPPGP DSAWSSPPFA PTIRDGVLYG RGAADMKSSL AAFVTAIERF VAAHPDHAGS IALLLTSDEE GIATHGTVKV VEALAARGER LDYCVVGEPT SVQTLGDMIK NGRRGSLSGT LRVKGQQGHV AYPQLARNPI HLFAPALAEL AASDWDQGNE FFPPTTWQVS NIHAGTGANN VIPGVCEVMF NFRFGSVSSA DELKSRTCEV LDRHGLDYEI DWHLSGKPFI TGRGRLVGAL SAAIRETLGV ETELSTTGGT SDGRFIAEIC AEVVEFGPVN ASIHKIDEHI AADAIEPLSV VYERTLTALL VPGRL
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