Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_2194 |
Symbol | dapD |
ID | 7085547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 2477595 |
End bp | 2478416 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643699214 |
Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
Protein accession | YP_002355830 |
Protein GI | 217970596 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.532202 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGCTC TGCAATCGAT CATCGACACC GCCTTCGAGA ACCGCGCCAG CCTGTCGCCC ACTTCCGCCC CGGCAGAGAT CCGCAACGCG GTCGAAGAGG TCATCGCCGG CCTGGATGCC GGCACGCTGC GCGTGGCCGA GAAGAAGGAC GGTCAGTGGG TGGTCAACCA GTGGATCAAG AAGGCCGTGC TGATCTCCTT CCGCCTGCGC GACAACGAGC TGGTGCAGGC CGGCGGCCTC AACTTCTTCG ACAAGGTGGC GACCAAGTTC GGCGACTACA CCCCCGAGCA GTTCCGCGAG GGTGGCTTCC GCGTGGTGCC GCCGGCGGTC GCCCGCAAAG GCAGCTTCAT CGGCCGGAAC GTCGTGCTGA TGCCGTCCTA CGTGAACATC GGCGCCTATG TGGACGAAGG CACGATGGTC GACACCTGGG CCACCGTCGG TTCGTGCGCG CAGATCGGCA AGAACGTGCA CCTGTCGGGC GGCGTGGGCA TCGGCGGCGT GCTCGAGCCG GTGCAGGCCG GACCGGTGAT CATCGAGGAC AACGTCTTCG TGGGCGCGCG CTCCGAGGTC GTGGAGGGCG TGATCATCGA GGAGAACGCG GTGCTGTCGA TGGGCGTGTA CATCGGCATG AGCACCAAGA TCTACGACCG CGAGACCGGC GAGATCACCT ACGGCCGCGT GCCGGCGGGC GCCGTCGTGG TGCCCGGCAG CCTGCCTTCG GCCTGCGGCA AGTACAGCCT GTACTGCGCG GTGATCGTCA AGAAGGTGGA CGCGCAGACC CGCGCCAAGA CCGGCATCAA CGAGCTGCTG CGCGGCGCCT GA
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Protein sequence | MHALQSIIDT AFENRASLSP TSAPAEIRNA VEEVIAGLDA GTLRVAEKKD GQWVVNQWIK KAVLISFRLR DNELVQAGGL NFFDKVATKF GDYTPEQFRE GGFRVVPPAV ARKGSFIGRN VVLMPSYVNI GAYVDEGTMV DTWATVGSCA QIGKNVHLSG GVGIGGVLEP VQAGPVIIED NVFVGARSEV VEGVIIEENA VLSMGVYIGM STKIYDRETG EITYGRVPAG AVVVPGSLPS ACGKYSLYCA VIVKKVDAQT RAKTGINELL RGA
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