| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2174 |
|---|
| Symbol | |
|---|
| ID | 7085527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 2448110 |
|---|
| End bp | 2448877 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643699194 |
|---|
| Product | undecaprenyl diphosphate synthase |
|---|
| Protein accession | YP_002355810 |
|---|
| Protein GI | 217970576 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0790587 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGAG GGCTGTTCAG GAGTTCCACC CGCGACATTC CCGACGTCTC GCAGGTGCCG
AAGCACATTG CCGTCATCAT GGACGGCAAT GGGCGCTGGG CGCGCAAGCG CATGCTGCCT
CGCGTCGCGG GGCATGCGCG CGGTGTCGAG GCGCTGCGCG CCACCGTGCG CGGCTGCGTC
GATCGCGGGG TGGAGTACCT CACCGTGTTC GCGTTCAGCT CCGAGAACTG GCGCCGCCCG
CAGGACGAGG TTTCTTTCCT GATGCAGCTC TTTCTGAAGT CGCTGCAGAA GGAGATCCGC
CGCATGCACG ACAACGACAT GCGCTTCCGC GTGATCGGGG ACCTCTCGAA GTTCGATCCG
CGGCTGGTGG ACATGATCCG CGAGGCCGAG ACGCTCACCG CCGGCAATGG CGGACTCAAC
TTCACCGTCG CGGCCAACTA CGGCGGTCGC TGGGACATTC TCGATGCGAT GTCGCGCCTG
ATGGCGCGCG AACCGGGGCG CCTGGAACGC TTCACCGAAG ATGAGATCGC CTCCGAGCTG
TCGATGAGCT TCGCGCCGGA GCCCGATCTC TTCATCCGCA CGGGTGGCGA GAAGCGCATC
AGCAACTTCC TGCTCTGGCA GCTCGCCTAT ACCGAGCTCT ACTTCACCGA CGTGCTCTGG
CCCGACTTCG ACGACGGTGC GCTCGGGCAG GCCATCGGCT CCTATCAGGG GCGGGAGCGG
CGCTTCGGCC GCACCAGCGA GCAGCTCAAG GCCGACGCCG GGGAATAG
|
|---|
| Protein sequence | MIGGLFRSST RDIPDVSQVP KHIAVIMDGN GRWARKRMLP RVAGHARGVE ALRATVRGCV
DRGVEYLTVF AFSSENWRRP QDEVSFLMQL FLKSLQKEIR RMHDNDMRFR VIGDLSKFDP
RLVDMIREAE TLTAGNGGLN FTVAANYGGR WDILDAMSRL MAREPGRLER FTEDEIASEL
SMSFAPEPDL FIRTGGEKRI SNFLLWQLAY TELYFTDVLW PDFDDGALGQ AIGSYQGRER
RFGRTSEQLK ADAGE
|
|---|
| |