Gene Tmz1t_2168 details

Gene Information

• Locus tag: Tmz1t_2168
• Symbol: lpxD
• ID: 7085521
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: -
• Start bp: 2440726
• End bp: 2441760
• Gene Length: 1035 bp
• Protein Length: 344 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 643699188
• Product: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• Protein accession: YP_002355804
• Protein GI: 217970570
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• TIGRFAM ID: [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCCGAC TGCACGAGCT GGTCGATCGC CTGGGCGGCG AGATCGCGGG AGACGGCGAT 
GTCGCGGTTT CGCGCGTCGG CACGCTGGAC AAGGCGGGGG AGGGCGATCT CGCCTTCCTT 
GCCAACCGCA AGTACCTGTC GCAGGTCGGC GAGTGTGCGG CAAGTGCGCT GATCGTCACG 
CCCGACCTGC GCGAGGCGCT GGCCGGGCGC AACCTGATCC TGACCGCCGA CCCCTACCTG 
TACTTCGCAC GCGTCGCGCA GCTGTTCAAT CCGCCCCCCG CGGCGCGTCC CGGTATCCAT 
GCGCTCGCCG CGGTCGCCAG CACCCTGCCG GCCAGCGTGC AGGTGGGACC CGGCGCCTCG 
ATCGAGGAAG ACGTGGTGCT CGGCGAGGAC GTGGTGATCG GGCCCAACTG CCACGTGGGG 
CGCGGCACTC GCATCGGGCG CGGCACCCGG CTCTATGCCA ACGTCAGCAT CTACCACGAC 
TGCGTGATCG GCGAGGACTG CATCCTGCAT TCGGGCGTGG TCATCGGCGC AGACGGCTTC 
GGCTTCGCGC GCGAGAAGTC CGGCGCCTGG GTCAAGATCC CGCAGACCGG CCGTGTGGTC 
CTCGGCAACG ACGTCGAGAT CGGCGCCAAC ACGACGGTGG ACCGCGGTGC GCTCGACGAC 
ACCGTGATCG GCGATGGCGT CAAGCTCGAC AACCTCATCC AGATCGCGCA CAACGTGCGC 
GTGGGCGAGC ACACGATCAT GGCCGGCTGC GCCGGGGTCG CGGGCAGCGC CCGGATCGGC 
GCGCGCTGCA TGATCGGCGG CCAGGCCGGC ATCTCCGGAC ACCTGAGCAT CGCCGACGAC 
GTCGTGGTGT CGGCGTGGAC CCTGGTCGCC AAGTCGATCG CCAAACCGGG CGTCTACACC 
GGCAACCTGC CGCTGCAGAC GCATGGCGAC TGGGTGAAGA ACTTCTCCCA CCTGCGCCAC 
CTCGACGCGC TCGCCAGGCG CGTCCGCCAA CTCGAACAAA ACAGCGACGG TCCCGACGAC 
CGCTCGCAGG GCTGA 

 

Protein sequence

MFRLHELVDR LGGEIAGDGD VAVSRVGTLD KAGEGDLAFL ANRKYLSQVG ECAASALIVT 
PDLREALAGR NLILTADPYL YFARVAQLFN PPPAARPGIH ALAAVASTLP ASVQVGPGAS 
IEEDVVLGED VVIGPNCHVG RGTRIGRGTR LYANVSIYHD CVIGEDCILH SGVVIGADGF 
GFAREKSGAW VKIPQTGRVV LGNDVEIGAN TTVDRGALDD TVIGDGVKLD NLIQIAHNVR 
VGEHTIMAGC AGVAGSARIG ARCMIGGQAG ISGHLSIADD VVVSAWTLVA KSIAKPGVYT 
GNLPLQTHGD WVKNFSHLRH LDALARRVRQ LEQNSDGPDD RSQG