Gene Tmz1t_2164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2164 
SymbolrnhB 
ID7085517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand- 
Start bp2437712 
End bp2438323 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content72% 
IMG OID643699184 
Productribonuclease HII 
Protein accessionYP_002355800 
Protein GI217970566 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.159466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCCG AGCTGTTCGA TCCCGGACTG CCGTCCTCCA GCCTGATCTG CGGGGTCGAC 
GAGGCTGGCC GCGGGCCGCT GTGCGGGCCA GTGGTCGCCG CTGCGGTGAT CCTCGATCCC 
GCACGCCCGA TCGAAGGCCT GGCCGACTCC AAGAAGCTGA GCGAAGCCGC GCGCGAGCGC 
CTCGCACCGC TGATCCGCGC TCGCGCGCTG GCCTGGGCGG TGGCCGAGGC GAGCGTCGAG 
GAGATCGACC GCCTCAACAT CCTGCACGCC ACCATGCTGG CCATGCAGCG CGCGGTGATG 
GCGCTCGGGA TCGCGCCGGC CGAGGTGCGC ATCGACGGCA ACCGCTGCCC CAAGCTGCCC 
TATCCGGCGC GGGCGATCGT CAAGGGCGAC GCCACCGAGC CATCGATCTC GGCGGCCTCC 
ATCCTCGCCA AGACCGCACG CGATGCGGCC ATGCGCGAGC TCGACGCGCA GTGGCCGCAG 
TACGGGCTGG CCGCTCACAA GGGCTACCCG ACCGCCGCCC ACCTTGCGGC GCTCGCGGCG 
CACGGCGTGC AGGCCTTCCA CCGGCGCAGC TTCGCGCCGG TGAAGAAGCT GCTCGAGCGC 
CGGGATGAGT GA
 
Protein sequence
MNAELFDPGL PSSSLICGVD EAGRGPLCGP VVAAAVILDP ARPIEGLADS KKLSEAARER 
LAPLIRARAL AWAVAEASVE EIDRLNILHA TMLAMQRAVM ALGIAPAEVR IDGNRCPKLP 
YPARAIVKGD ATEPSISAAS ILAKTARDAA MRELDAQWPQ YGLAAHKGYP TAAHLAALAA 
HGVQAFHRRS FAPVKKLLER RDE