Gene Tmz1t_2156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2156 
Symbol 
ID7085509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand- 
Start bp2430149 
End bp2430826 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content72% 
IMG OID643699176 
ProductABC transporter related 
Protein accessionYP_002355792 
Protein GI217970558 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.506853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCAGC TCGACGACGT CACCCGCATC CTGCCCGGCG CCCCCGCGCG CGTGCTGTTC 
GAGCGCCTTG CGCTGCGGGT CAAGGCAGGG GAGTGCGTGG CGATCGTCGG CGAGTCGGGC 
TCGGGCAAGT CGACCCTGCT CAACTGCATC GCCGGCCTGG AACCGATCGA CGGCGGCACG 
ATCCGGGTCG GCGAAACACC CATCGAGCGC CTCGACGACG ACGCCATGGC GCGCCTGCGC 
CGTAGTCACT TCGGTTTCGT GTTCCAGGCT TTCCACATCC TGCCCCACCT GAACCTGCTG 
CAGAACGTGG CGCTCCCCTT GTGGCTGCTC GGCATCGCGG AGGCCGAGGC CGCGCGCCGC 
GCACAAGAGA TGCTCGGCCG CGTCGGGCTG GGCGCGCGCG CGCCGGATCC GCCGCAGCAA 
CTGTCCGGGG GTGAGCTGCA GCGCGTGGCG ATCGCGCGCG CGCTGGTACA TCGGCCTCAC 
CTGGTGCTGG CGGACGAGCC CACCGGCAAC CTCGACCCGG GGCGAGCGAG CGAGGTACTC 
GACCTGCTGC TCGGCCAGAT CCGCGACAGC CGCGCCGCCG GCGTCATGGT CACGCACTCG 
CGCAGCGCGG CGGCGCGCGC CGACCGCGTG CTGGAACTTC GAGCCGACGG GCTGCATGAC 
GTCACGGGGC ATCCGTGA
 
Protein sequence
MLQLDDVTRI LPGAPARVLF ERLALRVKAG ECVAIVGESG SGKSTLLNCI AGLEPIDGGT 
IRVGETPIER LDDDAMARLR RSHFGFVFQA FHILPHLNLL QNVALPLWLL GIAEAEAARR 
AQEMLGRVGL GARAPDPPQQ LSGGELQRVA IARALVHRPH LVLADEPTGN LDPGRASEVL 
DLLLGQIRDS RAAGVMVTHS RSAAARADRV LELRADGLHD VTGHP