| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2135 |
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| Symbol | |
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| ID | 7085120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 2409837 |
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| End bp | 2411021 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643699154 |
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| Product | integrase family protein |
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| Protein accession | YP_002355771 |
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| Protein GI | 217970537 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.182439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATTTGA TGCCCCGAAA CGCGTTCGGC CCGTTGGAAC TGGTCAACTT GCCAAGCGAA
CTCAACGGAA GTGTCGGTAA TAACCGCGCC GTTGGCGGTC GGCCGCAGAT TTCGGCGCAG
AACGACGTCG ATGCCGTCAA AGCGTGGCTC GCCCGCTTTG TCGAGACCCG AACGACGTTC
GATAGCTACC GAAAGGAGGC TGAGCGCCTC CTCCTCTGGT CGGTCACGGA GTTGGGCAAA
CCCCTTTCCA GCCTCAGTCA CGAGGATCTG TTGTTGTACA GGCGATTTCT CGCAGATCCA
CAGCCCGTTG CACGCTGGGT CATGGCCAAA GGCCGCAAAT GGCCCCGAAA CGATCCTGCC
TGGAGACCGT TTTCTGGGTC GCTGTCTGCC AGCAGTCAGC GACAAGCGAT TGTCATCCTG
AACACGATGT TCGCCTGGCT TGTGAATGCT GGGTACCTTG CCGGCAATCC ACTATCCATC
TCTCGACAGC GCCAGCGGCG GTCGAAGCCC CGAATCACCC GATTCCTCGA TGAGCCTACC
TGGGTGGAAG TCAAGGCATC GATCGAAGCG ATGCCAAACG AGACGGATCG CGAGCGCGAG
CATTACTTCC GCGTGCGCTG GCTCTTTAGT CTGCTCTACC TGTGCGGCCT TCGTATCACG
GAGGTCACGA CCAATACCAT GGGGTGCTTC TTTTCCCGGC GTGACCGAAA CGGGGACGAC
CTTTGGTGGC TTGAAGTAAC GGGCAAAGGT GAGAAGACGA GGATCGTCCC TGCCACGAAC
GAACTGATGA TGGAGTTGGT GCGCTACCGC CGGGAGTACG CGTTGGCGCC CTATCCAGTT
CCAGGCGAGC CGACCCCCCT CCTCCTTCCA ATCGGCGGAC AGCGTCGGGC TCTGACGCGC
GGGGCCGTGC ATCTAGTCGT GAAAGAAGTC TTTGAGCGTG CAGCGAAGCG AGTTGAGGAG
CGTGGCGATG AGTTTGTGTC GCGGGCAAAC GCACTGCGTG CGGCTTCGGC GCACTGGCTA
CGTCACACGG CCGGTTCGAA CATGGCAGGC GCCGAGGTCG ACTTGCGGTT CGTCCGCGAT
AACTTAGGCC ACGAGTCAAT CACAACCACG AGCCTATACC TCCATGGCGA CGATGATGAA
CGCCACAAGG CTACAGAGCG CGGTCACCGC ATCGCCTGGT CCTGA
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| Protein sequence | MNLMPRNAFG PLELVNLPSE LNGSVGNNRA VGGRPQISAQ NDVDAVKAWL ARFVETRTTF
DSYRKEAERL LLWSVTELGK PLSSLSHEDL LLYRRFLADP QPVARWVMAK GRKWPRNDPA
WRPFSGSLSA SSQRQAIVIL NTMFAWLVNA GYLAGNPLSI SRQRQRRSKP RITRFLDEPT
WVEVKASIEA MPNETDRERE HYFRVRWLFS LLYLCGLRIT EVTTNTMGCF FSRRDRNGDD
LWWLEVTGKG EKTRIVPATN ELMMELVRYR REYALAPYPV PGEPTPLLLP IGGQRRALTR
GAVHLVVKEV FERAAKRVEE RGDEFVSRAN ALRAASAHWL RHTAGSNMAG AEVDLRFVRD
NLGHESITTT SLYLHGDDDE RHKATERGHR IAWS
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