| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2101 |
|---|
| Symbol | |
|---|
| ID | 7085371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 2375460 |
|---|
| End bp | 2376146 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643699121 |
|---|
| Product | two component heavy metal response transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_002355738 |
|---|
| Protein GI | 217970504 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCC TGGTCGTCGA AGACGAACTC AAACTCGCCG AATACCTGCG CAAGGCGCTG
ACCGAAAACA GCTACGTCGT CGATGTCGCA CACAGCGGCA CCGAGGGTCG CTACCTCGCG
ATCGAAGGGC ATTACGATCT CGTCCTGCTC GATGTCATGC TGCCTGGCCT GGATGGTTTC
GCCGTCCTGC GCGAATTGCG GCGCGACAAG CACGTACCGG TGCTGATGCT CACCGCGCGC
GACAAGGTGG AGGATCGCGT GAAGGGGCTG CAGGCGGGTG CGGACGACTA TCTCGTGAAA
CCCTTCGCCC TGTCCGAACT GCTCGCACGC GTCCAGGCGC TGTTACGGCG TGGCGCCCTC
CCAACACCGG GTCAGGATTC CACCGTTCTC AAACTGGCCG ACCTCGAACT CGATCTGGTC
CGGCGCAAGG CGTCGCGCTC CGGACAGCGC CTCGATCTGA CGGCCAAGGA GTTCACGCTG
CTGACCTTGC TGCTGCGCCG GCACGGGCAG GTCCTGTCGC GCACGGCACT GGCCGAGCAG
GTGTGGGACA TGAACTTCGA GAGCAATACG AATGTCGTGG AGGTTGCGGT GCGCCGCTTG
CGCAGCAAGC TCGATGACCC CTTCGCGAAG AAGCTGCTGC ACACCGTGCG CGGCATGGGC
TACGTGCTGG AAGACCGGGA ACCCTGA
|
|---|
| Protein sequence | MKILVVEDEL KLAEYLRKAL TENSYVVDVA HSGTEGRYLA IEGHYDLVLL DVMLPGLDGF
AVLRELRRDK HVPVLMLTAR DKVEDRVKGL QAGADDYLVK PFALSELLAR VQALLRRGAL
PTPGQDSTVL KLADLELDLV RRKASRSGQR LDLTAKEFTL LTLLLRRHGQ VLSRTALAEQ
VWDMNFESNT NVVEVAVRRL RSKLDDPFAK KLLHTVRGMG YVLEDREP
|
|---|
| |