| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2072 |
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| Symbol | |
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| ID | 7085342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 2344254 |
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| End bp | 2345741 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643699094 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002355711 |
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| Protein GI | 217970477 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0610186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGAGA ATGACCGCGG TACATCCCCT CGCAGTCGCC AGGCCCGCCC AGGCCATGAG
ACCGGCCCAT CGGCCCGCCA TCGGCTCGTC GGCACGCTGG CGGTGGCGGT GCTGGCGATG
CTGAGCGGTT GCGCCTCACT GGCACCCGCG CTCGATCCCA TAGCGCTCCC CGTCGCATCG
AACTGGCGGA CGCAGCCCGA CACGCCGGGC GTTGCGGCCG CGGCTGACCT GGCGTGGCGC
GAGTACTTCA CCGACCCGGC CTTGCAGGCG CTGATCGAGA CCGCGCTGGA AAACAACCGC
GATCTGCGCG TGGCGGTGCT GCGCACCGAG GAGGCGCGCG CCGCCTTCCG CATCCAGCGT
GCGCAGCAGG CGCCAATGGT CGGCGTGGGG GCGCAGCAAA TCCGCACTGG CCTGCCCGAT
GGGCTACAGC CGCTGGCGGG CCGCTCGGTC CTGGAGGTCA ACGTAGCCTC CGTGGGCATC
AGCAGTTGGG AGTTGGACCT GTGGGGCCGC GTACGCAGCA TGAAGACCGC CGCATTGGAG
CAATGGCTGG CCACCGAGCA GGGCCACCGC GCCGTGGAGT TGGCGCTGGT CGCCCAGGTC
GCCGATGCCT ACCTGGGCCT GCGCGAACTC GACGAGCGCA TCGCGCTGGC AAGGCGCACC
GTTGAAAACC AGCAAGAACT GGAACGAATC TTCCAGAAGC GCTTGGAGCT GGGCCATGGC
TCCCGGCTCG AACTGACCCA GGTGCGTACC CTGCTCAGCC AGGGCAAAGC CCTACAGGTG
CAGCTCGAAT TACAGCGCGA ACAGCAGCGC AATTCCCTGG CGCTACTGCT CGGCAGCGAC
CCCCAATTGC CGCCGCCATC GGCCCCGATG GATGAAGCCC TGGTCATGCC CGAACTGAGG
CCCGGGCTGC CATCGGACCT GCTGGCGAAC CGCCCGGACA TCCTGGCCGC CGAGCATGCG
CTGCGGGCGC GCCAGGCCAA CATCGGTGCG GCGCGCGCCG CGTTCTTCCC ACGCATCGCA
CTGACTGGCG GCGCCGGCTC GGTCAGCACC AGCCTGAGCG ACCTGTTTTC GTCGGGCACC
CGGGCATGGT TGTTCCAGCC GACGATCGAA CTACCGATCT TCGATGCCGG TATGCGACAG
GCCAATCTCG ACGTTAGCGT CGTGCGGCGT GACATTGCCA TTGCCGAATA CGAACGCGCG
ATCCAGGCAG CATTTCGCGA CGTTTCCGAT GCCCTGGCCG CAAGGCAGAA GCTCACCGAG
CAGCTCGTCG TGGCGCGCCA GGCGCACGCC GAGCAGAGCG AGCGTTTGAA ACTGGCGCGG
ATGCTGTTCG ATGCTGGCTC GGCGGCGCAC CTGGAGGTAC TGGACGCCGA GCGCGACCTG
CTTGCCGTCG AGCAGCAACT GGTGCAGGTA CGCAGGGCGG CCTTGTCAAG CCAAATCGGG
CTGTACGCGG CGCTGGGCGG TGACACGAAC CAGCCCCCGA AAAGATGA
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| Protein sequence | MHENDRGTSP RSRQARPGHE TGPSARHRLV GTLAVAVLAM LSGCASLAPA LDPIALPVAS
NWRTQPDTPG VAAAADLAWR EYFTDPALQA LIETALENNR DLRVAVLRTE EARAAFRIQR
AQQAPMVGVG AQQIRTGLPD GLQPLAGRSV LEVNVASVGI SSWELDLWGR VRSMKTAALE
QWLATEQGHR AVELALVAQV ADAYLGLREL DERIALARRT VENQQELERI FQKRLELGHG
SRLELTQVRT LLSQGKALQV QLELQREQQR NSLALLLGSD PQLPPPSAPM DEALVMPELR
PGLPSDLLAN RPDILAAEHA LRARQANIGA ARAAFFPRIA LTGGAGSVST SLSDLFSSGT
RAWLFQPTIE LPIFDAGMRQ ANLDVSVVRR DIAIAEYERA IQAAFRDVSD ALAARQKLTE
QLVVARQAHA EQSERLKLAR MLFDAGSAAH LEVLDAERDL LAVEQQLVQV RRAALSSQIG
LYAALGGDTN QPPKR
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