| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2052 |
|---|
| Symbol | |
|---|
| ID | 7083812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 2324243 |
|---|
| End bp | 2324971 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643699079 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_002355696 |
|---|
| Protein GI | 217970462 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.293024 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCGC CCCTCGAATC CCACGTCACC CTCTTGGTCG TCGACGACGA TCTCGTCGCG
CAGGCGCGCA TGAATGCCTA CTTTTCAAAG GAAGGCTACC GCGTGCTGCT GGCCGGCGAC
GGCGAGTCCT TCTGGCGACA GCTCGCCCAG GGAGAGGTCG ACCTCGTGCT CCTCGACATC
AACCTGCCCG GTCAGGACGG CTTGTCGTTG GCGCGCGAGC TGCGCGCGCG CGACGCCTCG
ATCGGCATCA TCCTCGTCAC CAGCCGCAAC GACGACGTCG ACAAGATCGT CGGGCTCGAG
GTGGGCGCCG ACGACTACGT GACCAAGCCC TTCAACCCGC GCGAGCTGCT CGCCCGCGTC
AAGAGCCTGC TGCGGCGCAG CGCGACGCGT CCGGCGGAGA CGGCGGACAG CCTGCGCTTC
GCGGGCTGGG TGCTGGAACT TTCGCGGCGC AGGCTGCGCG ACCGCGCGGG GCAGGACGTG
GCGCTGACGC GCGGCGAATT CGAAGTGCTC GCGCTGCTGG TGCGCCACCC CGGCGAGATC
CTCGACCGCG ATCGCCTCAG CCGCGCGGTG AGCGGGCACG ACTGGTCGCC GCAGGACCGT
TCGGTGGATG TGCTGGTGCG CCGCCTGCGC GCGAAGCTCG ACGATCCGGC ACGTACGGAC
TCGCTGATCG CAACGATCCG CGGCGAGGGC TATCGGCTGG CTGCCGACGT CGAGCCTGGC
GGGGTCTGA
|
|---|
| Protein sequence | MQAPLESHVT LLVVDDDLVA QARMNAYFSK EGYRVLLAGD GESFWRQLAQ GEVDLVLLDI
NLPGQDGLSL ARELRARDAS IGIILVTSRN DDVDKIVGLE VGADDYVTKP FNPRELLARV
KSLLRRSATR PAETADSLRF AGWVLELSRR RLRDRAGQDV ALTRGEFEVL ALLVRHPGEI
LDRDRLSRAV SGHDWSPQDR SVDVLVRRLR AKLDDPARTD SLIATIRGEG YRLAADVEPG
GV
|
|---|
| |