Gene Tmz1t_2050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2050 
Symbol 
ID7083810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2320098 
End bp2321171 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content73% 
IMG OID643699077 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_002355694 
Protein GI217970460 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID[TIGR02955] TMAO reductase system periplasmic protein TorT 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.285756 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTCGGGC TTGCGCTGGG CGCGCTGCCG AGCTGCGCCG CGGCGCTGGC CGGTGCGCAG 
CCGGCAGCCG AGTGGCCGCT GCAACGCTGG GCAGGCGATC ATCGCGCGGC AAACGGCGCG
GCCGAGACCG GGCCGGACAT CGTTCCGCCC TCCCCCACGC GTGGCTGGCG CCTGTGCGCG
ATCTACCCGC ACCTGAAGGA CAGCTACTGG CTGGCGGTGA ATTTCGGCAT GACCGAGGAG
GCGCGCGCGC TCGGCCTCGG CCTGGGCGTA CGCGAGGCCG GCGGCTACGG GCAGCTCGCC
CGCCAGCGTG AACGCGTGGC GGAGTGCCTG GAGGATGAGG CGGTCGATGC GCTGCTGATC
GGCACCGTCA GCCGCGGCGG GCTCAACGAC CTGCTCGCGC CGCAACTCGA CCATCGGCTC
GTGCTCGGGG TGGTGAACGA CATCGACCCG CAGGTGGTGC GCGCGCGCAT CGCCGTGCCC
TGGTACCAGC TCGGCTGGAC GATCGGCCGC TGGCTGGCCG CACGCCATCC CGCGGGCGGT
CCCCCCGCGC GGATCGCGTG GATTCCCGGA CCGGCGGACG CGGACTGGGT GGGCTTCATC
GACCGCGGTT TCCGCACGGG CATCGCAGGC AGCGCGGTGA ACGTCGTCGC CGAGCGCCAC
GGTGACACGG GGCGCGCGAT CCAGCGCCGG CTGGTGGAGG CTGTGCTCGA CGAGCAGCCG
CAGCTCGATT ACCTGGTCGG CAACGCGCCC ATGGCCGAGG CCGCGATCGC CGCGCTGCGC
CGGCGCGGAC GCGAGGGGGC GACGGCGATC GTGTCGTCCT ACCTGACTCC GGCCGTCCAT
GGTGGCATCC TGCGCGGCCG CATCCTCGCG GCGGTGACGG ATTTCCCGGT GCTGCAGGGG
CGGCTGGCGG TGCGTCAGGC CTTGCGGGCG CTGGAGGGGC GGCCGATCGA GCCCTACCTC
GGCCCGGCGG TCGAACTCGT GGACAAGAGC TCGCTGGGAC GTTTCCCGGT GCAGTGGATG
TTGCCGCCGG CGGGTTTCGT ACCGGTGTAT CAGATCGCAC CGGCACTGCC CTGA
 
Protein sequence
MLGLALGALP SCAAALAGAQ PAAEWPLQRW AGDHRAANGA AETGPDIVPP SPTRGWRLCA 
IYPHLKDSYW LAVNFGMTEE ARALGLGLGV REAGGYGQLA RQRERVAECL EDEAVDALLI
GTVSRGGLND LLAPQLDHRL VLGVVNDIDP QVVRARIAVP WYQLGWTIGR WLAARHPAGG
PPARIAWIPG PADADWVGFI DRGFRTGIAG SAVNVVAERH GDTGRAIQRR LVEAVLDEQP
QLDYLVGNAP MAEAAIAALR RRGREGATAI VSSYLTPAVH GGILRGRILA AVTDFPVLQG
RLAVRQALRA LEGRPIEPYL GPAVELVDKS SLGRFPVQWM LPPAGFVPVY QIAPALP