Gene Tmz1t_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_2016 
Symbol 
ID7083772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2279130 
End bp2279480 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content66% 
IMG OID643699041 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_002355662 
Protein GI217970428 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0178864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGATC GCACGAATGC CGCGAGCGGC GAAACCCGCG TCGAGAAGCT CAAGTCGATG 
CTCGACTTCC AGCACCAGGC GATCGTGAGC CGCATGCTGG TGAAGAATGC CGCCGGCAGC
GTCACGCTGT TCGCCTTCGA CAAGGGAGAG GGCCTCAGCG AGCACACCGC GCCCTTCGAT
GCGCTGCTGA TCGGTGTGGA GGGCGAAGCG GAAGTGCGCG TCGACGCCGA CATTCATCGG
CTCGGCGAGG GCGAAACGTT GCTGATCCCC GCCGGCGCGC CGCATGCGGT GGCGCCGCGC
GCGCAGTTCA AGATGTTGCT GGTGATGCTC AAGGGCGAGC GCAAGGCCTG A
 
Protein sequence
MTDRTNAASG ETRVEKLKSM LDFQHQAIVS RMLVKNAAGS VTLFAFDKGE GLSEHTAPFD 
ALLIGVEGEA EVRVDADIHR LGEGETLLIP AGAPHAVAPR AQFKMLLVML KGERKA