| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_2000 |
|---|
| Symbol | |
|---|
| ID | 7083755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 2261951 |
|---|
| End bp | 2262730 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643699025 |
|---|
| Product | yecA family protein |
|---|
| Protein accession | YP_002355647 |
|---|
| Protein GI | 217970413 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA |
|---|
| TIGRFAM ID | [TIGR02292] yecA family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGTA TGGAACAAAG GGGCGCGGAC GCGTCCGCGC TGCGCACGAT GAGCGACGAG
GATTTCGAGG CGCTGGAAGA GATCCTCACC TCGGACATCG TGCCCGAGGA CTGCATGGAC
CTCGAGATGC TCGACGGCTA CCTCGCTGGC GTGATGATCT CGCCGCGGCC AATCCCGGCC
GAGCGCTGGA TGCCCGGCGT GTGGTCGGCG CACGGCGACG AGGTCGGCTT CGGCTCGGGC
AGCGGCCTGC AGCGCGCGAT CCGGCTGGTG AAGGCGTATC ACAACGAGCT GCTCGCCACG
CTCGGCCTGG ACGACGAGGA CGAGGCGTGC TGGGAGCCGT TCTGCTTCGC GGTCGCCGAG
GGCGATGGGC TCAAGCTCGG CGAAGCCTGG ATCGACGGTT TCGCTCAGGG CCTGGACCTG
TGGCCCGAGG GCTGGGAGGA GGGGCTGGAC GCCGAGGCGG TCGAGGCCGT GCGCGAGACC
CTCGACGAGG TGCTCGCGCC CTGGGGCGAG GAGGACGCCG CGAAGGCCGA CGACGAGACC
CGCCTGGGCT GGCTCGCCGA CGTGGGCGAG GCGGTCAACG ACATCTTCGC CCACTGGCGC
GATCTGGGTC TGCCGGCCGC CGAGCCGCTG TCCACCGAGG CTCCGCGCAA GCCCGCCAGC
GCCGGCCCCG GCCGCAACGA TCCGTGCCCG TGCGGCAGCG GCAAGAAATA CAAGAAATGC
TGCGGCGCCA ACGGCGCCGA GCCCGAGCCC GAGCCCGAAT CCGGCGAAGC CGAAAACTGA
|
|---|
| Protein sequence | MNGMEQRGAD ASALRTMSDE DFEALEEILT SDIVPEDCMD LEMLDGYLAG VMISPRPIPA
ERWMPGVWSA HGDEVGFGSG SGLQRAIRLV KAYHNELLAT LGLDDEDEAC WEPFCFAVAE
GDGLKLGEAW IDGFAQGLDL WPEGWEEGLD AEAVEAVRET LDEVLAPWGE EDAAKADDET
RLGWLADVGE AVNDIFAHWR DLGLPAAEPL STEAPRKPAS AGPGRNDPCP CGSGKKYKKC
CGANGAEPEP EPESGEAEN
|
|---|
| |