Gene Tmz1t_1994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1994 
Symbol 
ID7083749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand+ 
Start bp2256967 
End bp2257515 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content67% 
IMG OID643699019 
Productoligoribonuclease 
Protein accessionYP_002355641 
Protein GI217970407 
COG category[A] RNA processing and modification 
COG ID[COG1949] Oligoribonuclease (3'->5' exoribonuclease) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0106356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAGG ACCCGAAGAC GCTGATATGG CTGGACATGG AGATGACCGG CCTCGAACCC 
GATCGTGACC GCATCATCGA GATCGCGATC GTGCTCACCG ACGAGGCGCT CGAAGTGATC 
GCCGAGGCGC CGGTGATCGC CGTGCATCAG CCCGACAGCG TGCTCGACGG CATGGACGAG 
TGGAACCGCA ATACCCATGG CAAGTCCGGG CTCACCGCTC GGGTACGCGC CTCCACGATG 
TCGGAGGCCG ATGCCGAGGC GCAGGTGCTG GCCTTCCTGC GCGCGCACGT GCCTGCGCGC 
ACCTCGCCGA TGTGCGGCAA TTCGGTGTGC CAGGACCGCA GGTTCCTCGC GCGCTGGATG 
CCGGAACTCG AGGCGTGGTT CCACTACCGC AACCTCGACG TGTCCACGCT CAAGGAGCTC 
GCGCGGCGCT GGCGTCCGGA GATCTACGCG GGTGTCAAGA AGGCGGGCAG CCACACCGCG 
CTCGCCGACA TCCACGAGTC GATCGCCGAG CTGCGCCACT ATCGCGACCA CTTCCTGCGC 
CTGGACTGA
 
Protein sequence
MAQDPKTLIW LDMEMTGLEP DRDRIIEIAI VLTDEALEVI AEAPVIAVHQ PDSVLDGMDE 
WNRNTHGKSG LTARVRASTM SEADAEAQVL AFLRAHVPAR TSPMCGNSVC QDRRFLARWM 
PELEAWFHYR NLDVSTLKEL ARRWRPEIYA GVKKAGSHTA LADIHESIAE LRHYRDHFLR 
LD