Gene Tmz1t_1977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1977 
Symbol 
ID7083732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2232020 
End bp2232535 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content68% 
IMG OID643699002 
ProductInvasion associated locus B family protein 
Protein accessionYP_002355624 
Protein GI217970390 
COG category[R] General function prediction only 
COG ID[COG5342] Invasion protein B, involved in pathogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAAGG CCCGAGCCCC GCGCGCGATT CCGCTGCTGC TGTCCCTGTC GCTCTTGCTC 
GCCCCCTCCA TGTTGCGCGC GCAGGTCGCG CAGGGGGAGC GTTTCGGCGA CTGGGTCTAC
GAATGCCAGG CGCTTTCCGG TGCGAGCAAG GCCTGTGCGC TGGTGCAGGT GCATTCCTTC
GGCGAGGGGG ATAAGCGCTC GGTGCGCTTC AACATCAGCC GTCCGCCCCA GGGCGGTGGG
GTCGGCATGA GTGTGGTCGT GCCGCTCGGC ATTCACCTGC CCAACGGCAT CCGGGGCGAC
GTCGATGGCA AGAACGGCTT CGCCATGACA CCGCTGACCT GTGTCGCGCA GGGCTGCATC
GCCACGGTGC CGCTCGACGC GGGCATGATC GAGGCACTGA AGGCCGGCCG CGTGCTCAAC
CTCGAGTTCT ACGGCAACGC CGGCAGGCAG CAGGTGAAGG TGGCCGGCTC GCTGAAGGGC
ATCACGAGCG GCTTGCGGGC GAGCGGGCTG GATTGA
 
Protein sequence
MLKARAPRAI PLLLSLSLLL APSMLRAQVA QGERFGDWVY ECQALSGASK ACALVQVHSF 
GEGDKRSVRF NISRPPQGGG VGMSVVVPLG IHLPNGIRGD VDGKNGFAMT PLTCVAQGCI
ATVPLDAGMI EALKAGRVLN LEFYGNAGRQ QVKVAGSLKG ITSGLRASGL D