| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1969 |
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| Symbol | |
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| ID | 7084437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 2219477 |
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| End bp | 2221168 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643698994 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_002355616 |
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| Protein GI | 217970382 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00305659 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGAA TCCAGCCCCG CTCCATCCCG CAGCAAGCCT TCGCCCGCCT CGCCGACGCC
GGCCTGCATC CGCTGCTCGC CCGCCTCTAC GCCGCGCGCG GCATCGCGCG CGCCGACGAG
CTCGACACCA GCCTGAAGAA CCTGCTGCCG CCCGAGGCGC TCACCGGCAC GGCGGAAGCC
GCGATCCTGC TCGCCGACGC CATCGAGGCC GGCGCGCGCA TGGTCATCGT CGCCGACTAC
GACTGCGACG GCGCCACCGC CTGCGCGGTG GGCGTGCGCG CGCTGCGCGC CTTCGGTGCC
GACGTGCATT ACCTCGTGCC GGACCGCGTC ACGCTCGGCT ACGGCCTCAC CCCGGCCATG
GTCGAGATCG CCGCGCGCCT CGAGCCCGAC GTGCTGATCA CCGTCGACAA TGGCATCGCC
AGCGTCGAGG GCATCGCCGC CGCGCGCGCC CATGGCATGG CCACGGTGAT CACCGACCAT
CACCTGCCCG GCGACGTGCT GCCCGAAGCC GACGTGATCG TGAACCCCAA CCAGCCCGGC
TGCGACTTCC CGAGCAAGGC GCTGGCCGGC GTGGGCGCGA TGTTCTACAC GATGCTCGCG
CTGCGCGCCG AACTGCGCGA GCGCGGCGCC TTCGCCGGCG CCAAGGAACC CAACCTTGCC
GAGCTGCTCG ACCTCGTCGC GCTCGGCACC GTGGCCGACG TGGTCAAGCT CGACCGCAAC
AACCGCATCC TGGTCGCGCA AGGCCTCGCG CGCATGCGCG CCGGGCGCCT GCAGCCCGGC
ATCCGCGCGC TGTTCGGGCT CGCCGGGCGC GACCCGGCGC GCGCCAGCAC GATGGACCTC
GGCTTCATGA TCGGCCCTCG CCTCAACGCG GCCGGGCGAC TCTCCGACAT GAGCCTGGGC
ATCGAGTGCC TGATCACCGA CGACCCCGGC CGGGCGATGA ACATCGCCCA GGAGCTCGAC
AAGCTCAACC GCGAACGCCG CAGCATCGAG GCCGGCATGC AGGAAGAAGC GCTCGCCCGC
CTGGCGGGTT TCGACGCCGG CAACCGCGCC ACCGTGGCGC TCTTCGAACC CGACTGGCAC
CAAGGTGTGA TCGGCATCGT CGCCGGCCGC ATCAAGGAGC GGCTGCACCG CCCCACCATC
GCCTTCGCGC GCGCGAGCGA CGGCGAACTC AAGGGCTCCG GGCGCTCGAT CCCCGGCCTG
CACCTGCGCG ACGCGCTCGA CCTCGTCACC AAGCGCCAGC CCGACCTCAT CGTGCGCTTC
GGCGGCCACG CCATGGCGGC CGGCCTGACC ATCCGCGAAT CGGAACTCGC ACGCTTCGAC
GCGGCCTTCG AGGAGGTCGT CGGCGAACTG CTCGAGCCCG CCCAGCTCGA GCGCCGCATC
GATACCGACG GCAGCCTGGA ATCGGGCTAC TTCGCGCTCG ACGCCGCGCG CATGCTCGAC
AACGAGATCT GGGGCCAGGG CTTCCCGGCG CCGCTGTTCG ACGACGTCTT CCGCGTCGAG
CGCCAGCGCC TGTTGAAGGA CAAGCACCTC AAGCTCGAGC TCGCGCGCGG CAGCACGCGC
TACGAGGCCA TCCGCTTCAA CCACGCCGAG GGCGCCGCCG GCCAGATCCA CGCCGCCTTC
CGCCTCGGCA TCAATGAATA CAACGGCGTC GCCAGCGTGC AGCTGATGCT CGAACATTTC
GAGGCGGCGT AG
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| Protein sequence | MTRIQPRSIP QQAFARLADA GLHPLLARLY AARGIARADE LDTSLKNLLP PEALTGTAEA
AILLADAIEA GARMVIVADY DCDGATACAV GVRALRAFGA DVHYLVPDRV TLGYGLTPAM
VEIAARLEPD VLITVDNGIA SVEGIAAARA HGMATVITDH HLPGDVLPEA DVIVNPNQPG
CDFPSKALAG VGAMFYTMLA LRAELRERGA FAGAKEPNLA ELLDLVALGT VADVVKLDRN
NRILVAQGLA RMRAGRLQPG IRALFGLAGR DPARASTMDL GFMIGPRLNA AGRLSDMSLG
IECLITDDPG RAMNIAQELD KLNRERRSIE AGMQEEALAR LAGFDAGNRA TVALFEPDWH
QGVIGIVAGR IKERLHRPTI AFARASDGEL KGSGRSIPGL HLRDALDLVT KRQPDLIVRF
GGHAMAAGLT IRESELARFD AAFEEVVGEL LEPAQLERRI DTDGSLESGY FALDAARMLD
NEIWGQGFPA PLFDDVFRVE RQRLLKDKHL KLELARGSTR YEAIRFNHAE GAAGQIHAAF
RLGINEYNGV ASVQLMLEHF EAA
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