| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1964 |
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| Symbol | |
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| ID | 7084432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 2212742 |
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| End bp | 2215396 |
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| Gene Length | 2655 bp |
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| Protein Length | 884 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643698989 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002355611 |
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| Protein GI | 217970377 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.826699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCACA ACAGCAGGAA GATCCTCGGG GTATTGATCG CCACGGTGCT GGCGCTCAAC
GCATTCATTG CGGGACTGCT GGGCTATGCG ATGCTGGAGG CGAAGGCACG CAAGGAGCGG
GAGGTGCGCA CCACGGTCGA GAACCTGGCC CTGCTCCTCG ACCAGAGCGT CGGTTCCTCG
GTGCGCGAGA TCGACCTCCT GCTGCGCGGA GCGCAGAACC GGATCGAGCG TGCGTTGCGC
GACAAGGGGC GCCTGGAGCG CGACGATTTC GACTCGGTGA TCGACGTGCA TCGCGACGGG
CTGTCGCAGA CCGCCCAGGT CCGGGTCAGT GATGCCACCG GCACGGTTGT CCTCGGCGAC
CAGGTGACGG CCGAGACGCG TACAAGCTAT GCCGACCGCC CGTTCTTCAT CGATCATCGC
GCGCTCGACG ATGGCGAGAT GCAGGCCAGC AAGCTGCTGC ACGGGCGCAT TTCAAATACG
TGGATCGTGG TGTTCTCGCG CCGCTACAAC GCGCCCGATG GCGACTTCGC GGGCGTCGTG
ACCGCAGCCG TGCCGGCCGA TCATTTCCAG CGCCTGCTTT CGGGCCTGCA GCTCGGGCCG
CATGGCATCG CCCTGGTGCG CGACCTCGAC ATGACGCTGA TCGCGCGCTG GCCGCGTCTC
GATGCCCCGG CCGGCGTGAT CGGCAGTCGC GGCGGGTCGC AGGAGCTCAA CGAGATCGTC
GCCTCCGACG TTCGCGCGCA GTCCTTCTAC AGCGCGCGCA CGGCCGACGG CGTGGCGCGC
ATCAATGCCT ACCGCCGGCT CGAGCGCCTG CCGGCCTTCG TGGTCGTCGG CTGGGGCGAG
AAGGACTACC TCGCGCAGTG GAAGGAGGAC GTCGGCAAGG CCATGCTGCT GTGGGCACTT
TTCCTCGGCG TGACCGGGCT GGCCGCCTGG CTGCTGTATC GGCTGGTCGA CGCCAACGAC
CGTGCCAACG AGCGCAGCCG CATCCTGCTG CAGAACGCCA GCGACGGCAT CCACATCACC
GATGCGGAGG GCATCGTCAT CGAGGCCAGC GACGCCTTCT GCCGCATGCT CGGGCGATCG
CGCAGCGAGG TCATCGGCAT GCGGGCGGGG AGCTGGGATG CCTGCCATCC GGAGCCCGAC
ATGCGTGCGC TGATCAGCGA GCTGTTCGCC TCGAGCGAAG TGCACACCTT CGAAACGGCG
CATCGGCGCA AGGATGGAAG CGTGTATCCC GTCGAGGTGA CCGCGTTCCC GCTCGAGGTG
GACGGCAGGA CGGTGCTGTT CAACTCCGCG CGCGACATCT CCGCGCGCAA GTCGGCGGAG
GCCGAGGTCA GGAAGCTGGC CTACTTCGAC GCCTTGACCG GCTTGCCCAA CCGGCGGCTG
CTGATGGAGC GGCTGGAGCG GGCGCAGGCG AGCTGCGCGC GTCAGGGCAC GGTCGGCGCC
TTGCTGTTCA TCGACCTGGA CAACTTCAAG GCGGTCAATG ACACCGTGGG CCACCAGGAG
GGCGATCGGC TGCTCGTGCA GGTCGCCGCC ATCCTCGTAC GCTGCGTGCG CAAGGACGAT
ACCGTGGCCC GGCTCGGTGG CGACGAGTTC ATCGTCATGC TGGAGGAACT GGGCGGGGAG
GGGCGGGAGG CGGCGGAACA GGCCGCGGCG GTGGGCAGCA AGATCCTCGC GGCGCTGAAC
CAGCGTTTCC AGCTCGGCAG TTCGGAACAT CGCACCTCGG TGAGCATCGG CGTGAGCCTT
TTCGGCGAGT TGGCCGACGA ACCGGTCGAC GAGCCCCTGC GACGGGCCGA CATGGCGATG
TACCGGGCCA AGCTCGGCGG ACGCAACGCG GTGTGCTTCT TCGACCCCTC GATGCTGGCC
GACGTGCGCG CCCGGGCCGA CGTGGAGGCA GGGCTGTGGA TCGCGCTCGA GCAGCGCCAG
TTCGTGCTGC ATTACCAGCC CCAGGTCGCC GCCGACGGTG CGGTGCTCGG CGTGGAGGCG
CTGGTGCGTT GGCATCACCC GGTGCGCGGC CTGGTACCGC CGGGTGAGTT CATTCCGCTC
GCCGAAGAGT GCGGGTTGAT CCTTCCACTC GGGCGCTGGG TGCTCGAGGC CGCCTGCGCG
CAGCTGGCGG CGTGGGCGGA CGACCCGTGG CGCAGCAGGC TGGTGATCGC GGTCAATGTC
AGCGCACGCC AGTTCCTCCA TGAAGACTTC GTCGCCGGGG TGGTCGCCGC GCTCGAGCGC
TCGGGGGCCG ACCCGGGCCG GCTCGACCTG GAGCTGACCG AGAGCTCGCT GGTGACCGAC
GTCGACAAGG TCAGCGAGAA GATGGAGGCC CTCAAGGCGC TCGGCGTGGG ATTCTCGCTC
GACGACTTCG GGACCGGCTA TTCCTCGCTC GCCTATCTCA AGCGCTTGCC GCTGGATCAG
TTGAAGATCG ATCGCAGCTT CGTGCGCGAC ATCCTGGTCG ATCCCAACGA CGCGGCGATC
GCGCGCATGA TCATCGTGCT CGCCGACAAC CTCGGCCTGC GTGTGATCGC GGAAGGCGTG
GAGTGCGAGG AGCAGCGCGA CTTCCTCGCC CGCAACGGCT GCTCAAGCTA TCAGGGCTAC
CTTTTCAGTG CCCCGCAGCC GATCGACGCG CTCGAGGCCT TCCTCGACGC CCGAAGGTCT
CGGCCGGCGC GCTGA
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| Protein sequence | MQHNSRKILG VLIATVLALN AFIAGLLGYA MLEAKARKER EVRTTVENLA LLLDQSVGSS
VREIDLLLRG AQNRIERALR DKGRLERDDF DSVIDVHRDG LSQTAQVRVS DATGTVVLGD
QVTAETRTSY ADRPFFIDHR ALDDGEMQAS KLLHGRISNT WIVVFSRRYN APDGDFAGVV
TAAVPADHFQ RLLSGLQLGP HGIALVRDLD MTLIARWPRL DAPAGVIGSR GGSQELNEIV
ASDVRAQSFY SARTADGVAR INAYRRLERL PAFVVVGWGE KDYLAQWKED VGKAMLLWAL
FLGVTGLAAW LLYRLVDAND RANERSRILL QNASDGIHIT DAEGIVIEAS DAFCRMLGRS
RSEVIGMRAG SWDACHPEPD MRALISELFA SSEVHTFETA HRRKDGSVYP VEVTAFPLEV
DGRTVLFNSA RDISARKSAE AEVRKLAYFD ALTGLPNRRL LMERLERAQA SCARQGTVGA
LLFIDLDNFK AVNDTVGHQE GDRLLVQVAA ILVRCVRKDD TVARLGGDEF IVMLEELGGE
GREAAEQAAA VGSKILAALN QRFQLGSSEH RTSVSIGVSL FGELADEPVD EPLRRADMAM
YRAKLGGRNA VCFFDPSMLA DVRARADVEA GLWIALEQRQ FVLHYQPQVA ADGAVLGVEA
LVRWHHPVRG LVPPGEFIPL AEECGLILPL GRWVLEAACA QLAAWADDPW RSRLVIAVNV
SARQFLHEDF VAGVVAALER SGADPGRLDL ELTESSLVTD VDKVSEKMEA LKALGVGFSL
DDFGTGYSSL AYLKRLPLDQ LKIDRSFVRD ILVDPNDAAI ARMIIVLADN LGLRVIAEGV
ECEEQRDFLA RNGCSSYQGY LFSAPQPIDA LEAFLDARRS RPAR
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