Gene Tmz1t_1930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1930 
Symbol 
ID7084398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2172805 
End bp2174049 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content72% 
IMG OID643698955 
Producthistidine kinase 
Protein accessionYP_002355577 
Protein GI217970343 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.53323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGATCC GCATCGCGGT GTCGGTCACG GCCGTGCTGG TCGTGCTCAT CGTGGCGCAG 
TCGCTCGCCC TGGTGCGGCT CAACGAGGAG ATGGAGGAGG AGTTCATCGA CGGCACACTC
GAGGAGCAGC TGCACTACAG CATCGAGCAT AGCCGCCGCC TCGGTACCCT GATCGGGCCG
CAGACTCCGA ACATGACGCT CTACCGCTTC GCGCCGGGTG CGCTGCCACC GCAAGGGCTG
AGCCCCGCGC TGGCCGGACT CGCGGTGGGC AATCACGAGG AATGGTCCGC CGGGCGTGAG
CTGCACGTTG CAGTGCGAGA GGCCGATGGC CAGCGCTACG TGCTCGTGTA CGACGAATCC
GAGCATCGCA AGCGCGAGTC GGCCGTGGTC GCCACGGTCG TGATCGGCGG CCTGGTGCTG
AGCGCCTTGT CCTTTCTCCT CGTCTACGCC ATCGCCGCAC GGCTCACGCG CGGGCTGGAG
ACGCTGGCCG AGCGCGTCGA GGAGGGGGGC GACGGCACGC CCTTCGCCGA GGACGGACTC
GAGGCCGAGC TCCGCGTGGT GGCGCGTGCG CTGGACAGGG CCGAGGCGCG CCAGGCCGCC
GTGCTGGCGC GCGAGCGCGA TTTCAACGCC AATCTGTCGC ACGAGCTGCG CACCCCGCTC
GCCGGTATCC GAAGCGATGC CGAGATGCTG CTGAACGATC CGGTCCTGTC CGACAAGGCC
CGCCGCCGTG CCGAGCGCAT CATCGCCACC ACCGACCGCA CCACCACGCT CGCCCAAAGC
CTGCTGCTGC TCGCCCGCGA GGCGCGGCCG CAGGTGCTCG AACCGATCGA CCTGAGCGCG
GCGGTGCGCG ACGCCTGGAC GCGCTTGCAC CCGGCCGGCG CTGCGGCCGC AGCGCCCAGC
ATCCGTGTCG ACCCCCAGGC CGAGCTCGTC GCCGACCCCG GCCTGCTGGC GCTCGTGCTG
CGCAACCTGC TGGAGAACGC CCTGCGTCAT GGCGAGGGGC GCGCGATCGA GGTGGTGCTG
GAAGGGCGTC GCCTCGAGGT GTGCGATCGT GGCCCCGGCT TCGGCGACGA GGACCCGGCG
CGCTGCTTCG AGCGCTTCCG GCGCGGCGGG GCCAAGCCGG GACACGGCCT CGGCCTGGCG
CTGGTGCGGC ACATCTGCAC CGCCTGCGGC TGGGAGGCCC GCGCCGCCAA CCGGCCCGAC
GGCGGCGCCT GCCTGACGAT CGACTTCGGG CCCGCGTCGA GATAG
 
Protein sequence
MRIRIAVSVT AVLVVLIVAQ SLALVRLNEE MEEEFIDGTL EEQLHYSIEH SRRLGTLIGP 
QTPNMTLYRF APGALPPQGL SPALAGLAVG NHEEWSAGRE LHVAVREADG QRYVLVYDES
EHRKRESAVV ATVVIGGLVL SALSFLLVYA IAARLTRGLE TLAERVEEGG DGTPFAEDGL
EAELRVVARA LDRAEARQAA VLARERDFNA NLSHELRTPL AGIRSDAEML LNDPVLSDKA
RRRAERIIAT TDRTTTLAQS LLLLAREARP QVLEPIDLSA AVRDAWTRLH PAGAAAAAPS
IRVDPQAELV ADPGLLALVL RNLLENALRH GEGRAIEVVL EGRRLEVCDR GPGFGDEDPA
RCFERFRRGG AKPGHGLGLA LVRHICTACG WEARAANRPD GGACLTIDFG PASR