Gene Tmz1t_1917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1917 
Symbol 
ID7085686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp2162448 
End bp2163653 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content70% 
IMG OID643698942 
Productprotein of unknown function DUF214 
Protein accessionYP_002355564 
Protein GI217970330 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGCC TCGCCGGCCG CGACATCCTG CACGGCTGGG GCAAGTTCGT GTTCACCGGC 
GTCGGCCTGG GGCTGCTGAT CGGCGTCACG CTGGTGATGG CGGGCGTGTA TCGCGGCATG
GTCGACGACG GCAAGGCCTT GCTCGACAAC AGCGGCGCCG ACCTCTGGGT GGTGCAGCGC
GACACGCTCG GCCCCTATGC GGAGTCGTCC AGCGTCCACG ACGACCTCTA CCGCAGCCTG
CTCGGCCAGC GTGGCGTGGC GGGCGCGGCG AACATCACCT ACCTGACCAT GCAGGTGCGC
AAGGGCAGCG AGGACGTGCG CGCGATGGTG GTCGGCATCG CCGCCGGCCG GCCGGGGGCC
ACGCCGGGCT GGCCGCCGTA TCTGGTCGCG GGGCGGCAGA TCACGCGCGG GCATTACGAG
GCGGTGGCCG ACGTCGCCAG CGGCCTGCGC CTCGGCGAGC GCGTGGGCAT CCGGCGCAAC
CAGTACACCG TGGTCGGGCT GACCCGGCGC ATGGTGTCCT CGGCCGGCGA CCCGATGGTG
TTCATCCCGC TCAAGGATGC GCAGGAGGCT CAGTTCCTCA AGGACAACGA CGCCATCCTG
CAGGGTCGCC GCCGCACTGC GGCCAACCCG GCGCTCAACC GCCCGGGCGT GCCCGGCCTG
CTCGACGCGG TGCTCGCCTC GCAGAGCACC AACCCCTATG TGAATGCCGT GCTGCTCACG
CTCGCGCCCG GCCACGCGCC CGACGAGGTC GCCGAATCCA TCCGGCGCTG GCAGCGCCTC
ACCGTGTACA CCCGGGCGCA GATGGAGGGC ATCCTCGTCG GCAAGCTGAT CGCCACCTCC
GCGCGCCAGA TCGGCATGTT CCTGGTCATC CTCGCGGTGG TGAGCGCGGC CATCGTCGCC
TTCATCATCT ACACGCTGAC CATGGACAAG ATCCGCGAGA TCGCGGTGCT CAAGCTCATC
GGCACGCGCA ACCGGACCAT TGCCGCGATG ATCCTGCAGC AGGCGGTGGC GCTCGGGCTG
ATCGGCTTCG TCGTCGGCAA GATCGCCGCC ACCTGGTCGG CGCCCTTCTT CCCCAAGTAC
GTGCTGCTGG TGCCCGCCGA CACGGTGGCG GGCTTCGCGG CGGTGATGGC GATCTGCGTG
CTCGCCAGCC TGGTGTCGAT CCGGCTCGCG CTGCGCGTCG ATCCGGCCGA AGCGATCGGA
GGCTGA
 
Protein sequence
MISLAGRDIL HGWGKFVFTG VGLGLLIGVT LVMAGVYRGM VDDGKALLDN SGADLWVVQR 
DTLGPYAESS SVHDDLYRSL LGQRGVAGAA NITYLTMQVR KGSEDVRAMV VGIAAGRPGA
TPGWPPYLVA GRQITRGHYE AVADVASGLR LGERVGIRRN QYTVVGLTRR MVSSAGDPMV
FIPLKDAQEA QFLKDNDAIL QGRRRTAANP ALNRPGVPGL LDAVLASQST NPYVNAVLLT
LAPGHAPDEV AESIRRWQRL TVYTRAQMEG ILVGKLIATS ARQIGMFLVI LAVVSAAIVA
FIIYTLTMDK IREIAVLKLI GTRNRTIAAM ILQQAVALGL IGFVVGKIAA TWSAPFFPKY
VLLVPADTVA GFAAVMAICV LASLVSIRLA LRVDPAEAIG G