| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1907 |
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| Symbol | |
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| ID | 7085676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 2150358 |
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| End bp | 2153399 |
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| Gene Length | 3042 bp |
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| Protein Length | 1013 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643698932 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_002355554 |
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| Protein GI | 217970320 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.527158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCCCTCT CCTCCCTCCT GTATCGTTCG CGCGCCACGG TCGCCGCCCT CGTTCGCAGT
GACGGGATCG CGGGCAGGCT GGTGGTTGCC TGGCTGGCGT TCACGGTACT GCTCGGCGGC
TACTGGTTGC AGCTCGACCA CTCGCACACC GCGCTCGTCT CCCAGGCCGA GAGCCTGACC
CGGTTGCGTG CCCTGCAGAC CGCACACGCA TTGGCGCTGC ACACCGGAGC GCTGTTCCGC
AAGCTCGACT ATCTTTCCCT GCACCTGGGC GAGCATTGGC TGAAGGAAGG TCCGCAGGGC
GCGCGCGACG CCCTCGTGCG TGCGCACCTT GCGCTTCCCG AAGACGCCCT GGTCGGCATC
GACGTCGCCG ATGCCGAGGG GCGGCTCCTC TACTCCACCG TCGGCGAGCG CCTGCCGCTC
GAACTCGAGC GCTACGGCAT CGCGGACTTC GGGCATTTTC GCGTCCATCT GGAAGGGGAC
AAGGGCCTCT TCATCGGCCA GCCCTACCGC GGACGCATGA CCGGCGCCTG GATCGTGCCG
TTTTCCCGTG CGCTCGTGGA GGAGGGGCGA CTGCGCGGCG TGATCGTCCT GTCGGTGTCG
GTCGCCCATC TCACCCGGGC ACTGAGGGAA CTCTATCCGG GGACCTCGGA CGTGGCGGCG
CTCGTGCTCG ACGATGGTCA CTTCCTCGCC CACTCCAACC GGACCGCGGG AGCCATCGGG
CGCTCGGTGC CGTCCGACCG CCCCTATCTG CTCGATCGCG TGGCGCTGCA GGGCAACTTC
GATGCGACCG CGCCACTGGA CGGCGTCGAG CGTTATTACG CCTGGCACCG CGTTGCGGGC
TTTCCCGTCG TCGCCGCGCT CGGGCTGAGC AAGGCGGACG CGCTCGCCCC GGTGCGCGGC
ACGATCCGCG ACAACCGCCT CCGCAGCGGC CTGGGCTCGC TGCTGCTCTT GGCAGCGGCC
TTGCTGATCA GCCTGCTCTG GCGCCGCCAC GCCCGCCAGG GCGAAGAGCT CGGCCGCGCC
CGCAGGCGGC TGGAGAAGCT GGTCGGTCAC TTTCCGGGCA TGGCCTACCA GTTCCTGCTG
CGTGCGGACG GCAGCACCTC CATGCCCTAC TGCAGCCCGG GCGTGCGCGA ACTCTACGGG
GTGGGGCCCG AGGGGCTGCA GGATTCGGCG ATGCGCCTGT TCGAGCGCGT CCACGCCGAC
GATCTGGACC GTCTGCGCGA CAGCATCCTC CGCTCGGCCG CGAACCTCGC GCCCTGGCGA
TGCGAATTCC GCGTGCGGGG CGAGGGCGAC CGGCTGCGCT GGCTGCTCGG CGAAGCCAAC
CCCGAGCGCA CGCCCGAAGG CGACACGCTG TGGCACGGCT ATGTGCACGA CATCACCGAG
CGCCAGGTGG CTGCGCAGCA GTTGCGCGAA AGCGAGGCGC GCCTGCGCCA GGCGGTCGAC
GCCGTCCGCG ACGGCCTGTG GTCGTGGGAT CTCGCCCGCG ACCGCATCGC GCTCGACGAG
CGCATCCTCG AGATGCTCGA TCGTCCGGAA CTGGGCTCGG AGATGTGCTT CGACGACTTT
TGCGCGCTCG TCCATCCGGC CGATCGCCAG CGCCAGGACG CGATGCTGCG CGCCGTGCCG
AGCGCGACGC CCGACGCTCC CGTGGCGGGC GACCTCCGCC TGCGCGCCGC GTCCGGGCGC
TGGGTCTGGA TCCACGCCCG CGGCAGCGTC GTGGAGACCG ACGCGCAGGG TGGCCCGCGG
CGTCTCGTGG GCACCTTCTC CGACATCACC GCACGGGTCG CCGCCACGCA GTTGCGTCGG
GCCCTCCTCG ACCACAGCGC GGCCGCCATC GCCATGCTCG ACGCCGACCT CGACATCCTC
GAAGCCAACA GCCGCGCCCA CGAGATCTTC GCGCCGCCCT CGACCCCGAT CGGCGGACTC
AAGCTCACCG ACCTCGCCCT GCACGAGGAC CAGGCCATCT TCATCCCGCA GCACTACGCG
GCGCTGCGGG CCGGCGGACA GGTCAACATC GAACTGCCCT TGCGCGACAA TCGTGGCAAG
AAACGCTGGT TCGACGTACA TGGCGTGATG CTGGACCCGG AGGACCCCGA CAGCGACACC
GTCTGGACCC TGGTCGACAT CTCCGACAAG TACCGCACGC GGATGGCGCT CGCCACCGAG
CGCCTGCGCC TGAAGACGGT GCTCGAGCGC TTCCCGGGCG GCGTCCTGAT GGAAGACCAG
GACGGCCTGA TCAGCTCGGT GAACCGGGGG TTCTGCGAAC TGCTCGGTCT CGCGGCCGCC
CCGGACGAAC TGATCGGCCT CACGCACGCG GCGCTGTGCG AGCGGCTGGG TACGGAGCGC
ATGGGGTGGC TGCATCGGCC CGACGCCGAC CTCACGGCGG AGAAGCGCGC CACGGTCGAA
GTGGAGGGCG TGAAGGGGCG CACGCTGGAG ATCGACTGGC TGCCGATCGA ACACGACGGG
CGACGCCTCG GCCGCGTGTG GCTGCTGCGC GACGTCACCG AGCGCAAGGA GCGCGAACGC
CGGCTGGCGG AGCTCGCCGC CACCGACCCG CTGACCGGGC TGCCCAACCG GCGCAGCTTC
CTGGCGTGCC TGGACGCCGC GCTCGACGAC GCCCGGCGCG AGCCCGCGCG CGGCAGCGCA
CTGTTGATGA TCGACATCGA CCACTTCAAG CACGTCAATG ACACCCACGG GCACCCGGTC
GGCGACGAGG TATTGCAGCA CGCGGCACGG CTGATCCGCG GCGGCCTGCG CCAGCACGAC
CGGGCGGGCC GCCTCGGCGG CGAGGAATTC GCCGTGCTGC TCGACGACGT CGACGCCGAC
ACCGACACCG CCCTCACCCT CGCCGAACGC CTGCGCCGTA GCGTGGAGGC GGCGCCCGCG
GCGACCGCGG CCGGCGCGGT GTCGCTCACC ATCAGCCTCG GTCTTGCCCT CGTGTCGGGA
GGGGATCCCG CCCGCGTCCT CGGTGACGCC GATGCCGCGC TCTACCGTGC CAAGCGCGGC
GGCCGCAACC GTGTCTGCGT CGCAGTTCGC ACCCCGGGAT AG
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| Protein sequence | MPLSSLLYRS RATVAALVRS DGIAGRLVVA WLAFTVLLGG YWLQLDHSHT ALVSQAESLT
RLRALQTAHA LALHTGALFR KLDYLSLHLG EHWLKEGPQG ARDALVRAHL ALPEDALVGI
DVADAEGRLL YSTVGERLPL ELERYGIADF GHFRVHLEGD KGLFIGQPYR GRMTGAWIVP
FSRALVEEGR LRGVIVLSVS VAHLTRALRE LYPGTSDVAA LVLDDGHFLA HSNRTAGAIG
RSVPSDRPYL LDRVALQGNF DATAPLDGVE RYYAWHRVAG FPVVAALGLS KADALAPVRG
TIRDNRLRSG LGSLLLLAAA LLISLLWRRH ARQGEELGRA RRRLEKLVGH FPGMAYQFLL
RADGSTSMPY CSPGVRELYG VGPEGLQDSA MRLFERVHAD DLDRLRDSIL RSAANLAPWR
CEFRVRGEGD RLRWLLGEAN PERTPEGDTL WHGYVHDITE RQVAAQQLRE SEARLRQAVD
AVRDGLWSWD LARDRIALDE RILEMLDRPE LGSEMCFDDF CALVHPADRQ RQDAMLRAVP
SATPDAPVAG DLRLRAASGR WVWIHARGSV VETDAQGGPR RLVGTFSDIT ARVAATQLRR
ALLDHSAAAI AMLDADLDIL EANSRAHEIF APPSTPIGGL KLTDLALHED QAIFIPQHYA
ALRAGGQVNI ELPLRDNRGK KRWFDVHGVM LDPEDPDSDT VWTLVDISDK YRTRMALATE
RLRLKTVLER FPGGVLMEDQ DGLISSVNRG FCELLGLAAA PDELIGLTHA ALCERLGTER
MGWLHRPDAD LTAEKRATVE VEGVKGRTLE IDWLPIEHDG RRLGRVWLLR DVTERKERER
RLAELAATDP LTGLPNRRSF LACLDAALDD ARREPARGSA LLMIDIDHFK HVNDTHGHPV
GDEVLQHAAR LIRGGLRQHD RAGRLGGEEF AVLLDDVDAD TDTALTLAER LRRSVEAAPA
ATAAGAVSLT ISLGLALVSG GDPARVLGDA DAALYRAKRG GRNRVCVAVR TPG
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