Gene Tmz1t_1850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1850 
Symbol 
ID7084273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand+ 
Start bp2083492 
End bp2084535 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content70% 
IMG OID643698873 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_002355498 
Protein GI217970264 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.00686699 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTCG GCATCAACGG CATGGGTCGG ATCGGTCGCC TGGCGCTGCG CGCCGCAATG 
GGCGCGGCGG AGCGGCAGGC GGACGACCCG CGTGCGGACA ATCGCCTCGA GGTGGTCCAT 
CTGAACGAGA TCAAGGGCGG CGCGGCGGCG AGCGCGCATC TGCTCGCCTT CGACAGTGTG 
CAGGGACGCT GGCGGGCGGA CATCCGCGCC GACGGCGAGG ACGCGATCCG CATCGACGGC 
CGGCGCCTGT CCTTCTCCGC CCACGCCAGC CCGGCCGACA TCCCCTGGGG CGAGCTGGGC 
GTCGATGTCG TGCTCGAATG CACCGGCAAG ATCCTCACCC CCGAGGCGCT GCAGGGCCAC 
CTCGACCGCG GCGCCAGGCG CGTGATCGTC GCGGCCCCGG TGAAGACCGG CGGCGTGCTC 
AACATCGTCG TCGGCATCAA CCACGAACTC TACGATCCGG CGCGCGACCG CATCGTGACG 
GCGGCCTCGT GCACCACCAA CTGCCTCGCG CCGGTGGTCA AGGTCGTGCA TGAAAACCTC 
GGCATCCGCC ATGGCCAGAT CACCACCATC CACGATCCCA CCAACACCAA CCTGGTGGTC 
GACGCGCCGC ACAAGGACCT GCGCCGCGCG CGCAGCTCGC TGCTGAGCCT GGCGCCCACC 
ACCACCGGCA GTGCCACCGC GATCGCGCTG ATCTACCCGG AGCTGAAGGG CAAGCTCAAT 
GGCCACGCGG TGCGCGCGCC GGTCCTCAAC GCCTCGCTCA CCGACTGCGT GTTCGAGCTG 
CGGCGCGCGA CCACGGTGGA GGAGGTGAAC GCGCTGTTCA AGGCCGCGGC GGAAGGCCCG 
CTCGCCGGCA TCCTCGGCTA CGAGGAGCGC CCGCTGGTGA GCATCGACTA CGCGCGCGAC 
ACGCGCAGCG CCATCGTCGA CGCGCTGTCG ACCATGGTGA CCGACGGCAC GCTGCTCAAG 
GTGTACGCCT GGTACGACAA CGAGATGGGC TACGCCTGCC GCATGGTGGA TCTGGCCTGC 
CACATGGAAG CCGTGGGCCT CTGA
 
Protein sequence
MKVGINGMGR IGRLALRAAM GAAERQADDP RADNRLEVVH LNEIKGGAAA SAHLLAFDSV 
QGRWRADIRA DGEDAIRIDG RRLSFSAHAS PADIPWGELG VDVVLECTGK ILTPEALQGH 
LDRGARRVIV AAPVKTGGVL NIVVGINHEL YDPARDRIVT AASCTTNCLA PVVKVVHENL 
GIRHGQITTI HDPTNTNLVV DAPHKDLRRA RSSLLSLAPT TTGSATAIAL IYPELKGKLN 
GHAVRAPVLN ASLTDCVFEL RRATTVEEVN ALFKAAAEGP LAGILGYEER PLVSIDYARD 
TRSAIVDALS TMVTDGTLLK VYAWYDNEMG YACRMVDLAC HMEAVGL