| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1847 |
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| Symbol | |
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| ID | 7084270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 2073454 |
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| End bp | 2075505 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 643698870 |
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| Product | exodeoxyribonuclease V, alpha subunit |
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| Protein accession | YP_002355495 |
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| Protein GI | 217970261 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.401727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCCCA TCCACGCTTC GCCCTCGCCT GCCGCGGCGC CACACGCGGC GACAGCGCCC
TCCGCGCCGA CCGACGCCCT CCTCGCCACC CTCGACGCCT GGACGGACGC CGGCCTGCTG
CGCCAGCTCG ACAGCGCCTT CGCCCGTTTC ATCGCCAGCC TCGACCCCGC CGCGCCGCCC
GCGCTGCTGG TGGGCGCAGC GGTGCTGGCG CGCATGGAGG GCCGCGGCCA TAGCTGCCTG
CCGCTCGCCC CGCTCGCCGC GACCGACCAG GATCTGCTGG CCTGGCCGAT GGAGGCCCAA
GCGGCGATCG CCGCGCTGTG GCAGAACCTG CCCGCCGATT CCGCCGCCTG GCTGGCGGCG
CTGCAGCAAA GCCCCGTGGT GCGCCGCATC GGCCACGACC CCGAACTCGG CCAGCCCCTG
CTGGTGGACG GACCCGACAC CGCACCGAGG CTCTACCTGC GCCGTTACTG GCAGTACGAG
CGCAGTGTCG CCGCCGCGGT GGCGGCGCGC TGCGCGCAAC CCGAGCCGGT CGACGAGGCG
CGTGCGCGCA CCTGGCTGGA CCGCCTCTTT CCGGCCGCGC CCGGCACTCC GGCCCACGAG
GCGGCGGTCG ACTGGCAGAA GCTCGCCTGC GCGATCGCCT TGCGCGGGCG CCTGAGCATC
CTCACCGGCG GCCCCGGTAC CGGCAAGACC TACACCGCCG CGCGCCTGCT CGCGCTGATG
CTCGCCACCC ACCCGGCGCC CGAGCGCCTG CGCATCGCGC TCGCCGCCCC CACCGGCAAG
GCCGCCGCGC GCCTGCGCCA GGCCATCGAC GGCTCGCTGC AGGCCCTCCA GCGCAGCCTG
GGCGGCCACC TCGACCTCGC CGCGCTGACC CGCCGCATCG GCGCCGCGCG CACCCTGCAC
GCGCTGCTCG GCGCCCGTCC CGACACGCGG CGCTTCCGCC ACCACGCCGG CAATCCGCTC
GACGTGGACG TGGTGATCGT GGACGAAGCC TCGATGGTGC ACCTGGAGAT GATGGCCGCC
CTGCTCGAAG CCCTGCCGCA CGGCGCGCGA CTGGTGCTGC TCGGCGACAA GGACCAGCTC
GCGTCGGTCG AGGCCGGCGC GGTGCTCGGC GACCTCTGCC GCGACGCCTC GGACGGACGC
TACGACGCCG AGACCGCACG CTACCTGCTC GCCACCACCG GCGAGGCCCT GCCCACGCGC
TACCTGGAGC CCACGGACAA GGCGCCCGCG CTCGCCCAGC ACACCGTGAT GCTGCGCGAG
AGCCGGCGCT TCGAGGGGCC GATCGGCGCG CTCGCGCACG CGGTCAACGC GGCGCGCGAC
CCGGCCCTGC CCGCGCGCCT GCTGCGCGAG GATGCGAGCG GCGCGCTGCA CGGGGTCGAG
GGCGGACCGG TGGCGGCGGT GATCGCGCTC GCGCTCGGCG GCCGCAGGGG CGCACCCGCC
TGCTACCGCG ACTATCTGGA GCTGCTCGCA CGCGGACCGG CAGGCAAGGA CGCCGAGGCG
CACGCAGCGT GGGCGACGGC GATCCTGCAC GCCTTCGACC GCTTCCGCGT GCTGTGCGCG
GTGCGCGAAG GCGACTGGGG CATGGCCGGG CTCAACCGCG CGATCGAGCA CGCGCTCGCG
CGCGCGCGTC TGCTGTCGCC ACGCGGGACC TGGTACGCCG GGCGCCCGGT CATGGTCACC
CGCAACGACC CCGCGCTCGG CGTCTTCAAC GGCGACATCG GCATCACCCT GCCGGCGCTC
GAGAGCGGCG GCCTGCGGGT GCACTTCCTC GACGGCGAGG CCTTGCGCTC GGTGGCGGCG
AGCCGCCTCG CCCATGTCGA GACCGCGTTT GCGATGACGG TGCACAAGAG CCAGGGCTCG
GAGTTCGAGC ACACGGTGCT GGTGCTCGCC GCGCAGAGCG GCAACGTGCT CGTGCGCGAG
CTGATCTACA CCGCGATCAC GCGCGCCCGC AAGGCCTTCA GCCTGGTGGC CGAACGCGAG
GGCCTGCTGG AGCATGGCGT GTTGCAGGCG ACCCGGCGCG AGAGCGGGCT GCTGGACTTT
CAGGGAACGT AG
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| Protein sequence | MSPIHASPSP AAAPHAATAP SAPTDALLAT LDAWTDAGLL RQLDSAFARF IASLDPAAPP
ALLVGAAVLA RMEGRGHSCL PLAPLAATDQ DLLAWPMEAQ AAIAALWQNL PADSAAWLAA
LQQSPVVRRI GHDPELGQPL LVDGPDTAPR LYLRRYWQYE RSVAAAVAAR CAQPEPVDEA
RARTWLDRLF PAAPGTPAHE AAVDWQKLAC AIALRGRLSI LTGGPGTGKT YTAARLLALM
LATHPAPERL RIALAAPTGK AAARLRQAID GSLQALQRSL GGHLDLAALT RRIGAARTLH
ALLGARPDTR RFRHHAGNPL DVDVVIVDEA SMVHLEMMAA LLEALPHGAR LVLLGDKDQL
ASVEAGAVLG DLCRDASDGR YDAETARYLL ATTGEALPTR YLEPTDKAPA LAQHTVMLRE
SRRFEGPIGA LAHAVNAARD PALPARLLRE DASGALHGVE GGPVAAVIAL ALGGRRGAPA
CYRDYLELLA RGPAGKDAEA HAAWATAILH AFDRFRVLCA VREGDWGMAG LNRAIEHALA
RARLLSPRGT WYAGRPVMVT RNDPALGVFN GDIGITLPAL ESGGLRVHFL DGEALRSVAA
SRLAHVETAF AMTVHKSQGS EFEHTVLVLA AQSGNVLVRE LIYTAITRAR KAFSLVAERE
GLLEHGVLQA TRRESGLLDF QGT
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