| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1846 |
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| Symbol | |
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| ID | 7084269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 2071447 |
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| End bp | 2073213 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643698869 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002355494 |
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| Protein GI | 217970260 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.157265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGATC GCGTCCCCAT GCAGGTCGAC GCCGACATCC TGATCGTCGA CGACAACCCC
GCCAACGTCG AGCTGCTGCT CGCCCTGCTC GAAGACGCGG GCTACCTGCG TCTCGAAGGC
ATCACCGACC CGCGCAGGGT GGCGGCGCGG GTGGCAGAGC ACGCGCCCGA CCTCATCCTG
CTCGATGTGC GCATGCCGCA CCTGAACGGC CTCGAGCTCA TGGAGCGGCT GTCGGCGGGC
GGCGCGGAGG CGCCGGCGGT CATCATCCTC ACCGCGCAGA TCGACGATGC CACCCGTTAC
CGCGCGCTCG AACTCGGCGC GCGCGATTTC CTCACCAAGC CCTTCGACCA GGTCGAGGTG
TTGCAGCGCA TCCGCAACGT CCTGCACATG CAGCGCCTGA TGAAGGAGCG CGCCGAACGC
GCGGAACTGC TCGAAGCGCT GGTCGCCGAA CGCACGCAGG AACTCGTCGC GCGCGCGCGC
CACGATCCGC TCACCGGCCT GCCCAACCGG CTGTCTCTGC TCGACGAGCT CGGTGCATGG
CTGGCGGCGC GGCGTGACGC CGCGGTGCTC TTCCTGTCGA TCGAGGGCAT GGACGAGGTT
TCGCGCCTGC ACGGCTTCGG CGTGGCCGAC GAGCTCGCGC GCGCGGCAGC GCGGCGGCTG
CGCGAATGCG TCCCGGAGGG CTTCCTCGCG GTGTGGAACA GCACGCAGTG GGTCCTGCTG
TGCGACTGTG CTCCGGCGAG GGGCGCGACC GGCGCGCTCG CCGAGCGGCT GCTCGCCGGC
TTCCGCCCGC CGGTCGAGGT CGAACACATG CGGCTGCACC TCGGTCTGCG CATCGGCATC
GCTGCCGAGG CGGACGAGCG CAGCCCGGAG CAGCTCGTGC GCATGGCGGC GCTCGCGCTG
CCCGCAGGCG AGGGGCAGTG GCAGGCCTAC GAGGCCGAGC TCGAGACGCG GATGCAGCGC
CGCAACGGCA TCCGCGAGGC CTTGCGCGGC GCGGTCGGGC GCGACGAGTT CTCGCTGGTG
TACCAGCCCA AGGTGGAGCT GTGCAGCGGC GACATCGTCG GCGTCGAGGC CCTGCTGCGT
TGGGACAGCA GCGCCTACGG ACGCGTTTCG CCCGCCGAGT TCGTCCCCAT CGCCGAGGCC
AGCGGCGAGA TCCTCGCGAT CGGCGGCTGG GTCGTGCGCG CCGCGCTCGC CACGCTGCGG
CGCTGGCGCG AGGCGAGGCG CGTCGCCGAC GTATTCGGCA TGGCGATCAA CGTATCGACC
CAGCAGCTCA TGCAGCCGGA CTTCGCCGAG CGCCTCGTCG CCGAGGTCGA GGCCAGCGGC
GTGCCGCCCG CGGCGCTCGA GCTCGAGGTC ACCGAATCCG GCCTGATGCA GGACATGGCG
CTCGCCGCCC GCCACCTCGA CCACCTCGCG CGCGCGGGCT TCCGCATCGC GATCGACGAC
TTCGGCACCG GGCATTCCTC GCTCGCCTAC CTCAAGGCCT TGCCGGTCTC GGTGCTCAAG
ATCGACCGTG CCTTCATCCG CGAGCTCCAC GCCAATCCCG CCGACCAGCG CCTCACCGGC
ACCGTGATCG ACATGGCGCG GCATTTCGAA TTCATCACGG TTGCCGAGGG CGTGGAGCAG
GAGGCCCAGC TCGAACGCCT CATTGACATG GGCTGCGATC TCGTCCAGGG CTTCATGTTC
GCCCCGCCCC TGAAGGAGGA CGCGCTGTTC CGGCTGATGA AGACGGGCTT CGCGCACATG
CCGGTGTTCG GCGGGGCGGT GGCGTAG
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| Protein sequence | MTDRVPMQVD ADILIVDDNP ANVELLLALL EDAGYLRLEG ITDPRRVAAR VAEHAPDLIL
LDVRMPHLNG LELMERLSAG GAEAPAVIIL TAQIDDATRY RALELGARDF LTKPFDQVEV
LQRIRNVLHM QRLMKERAER AELLEALVAE RTQELVARAR HDPLTGLPNR LSLLDELGAW
LAARRDAAVL FLSIEGMDEV SRLHGFGVAD ELARAAARRL RECVPEGFLA VWNSTQWVLL
CDCAPARGAT GALAERLLAG FRPPVEVEHM RLHLGLRIGI AAEADERSPE QLVRMAALAL
PAGEGQWQAY EAELETRMQR RNGIREALRG AVGRDEFSLV YQPKVELCSG DIVGVEALLR
WDSSAYGRVS PAEFVPIAEA SGEILAIGGW VVRAALATLR RWREARRVAD VFGMAINVST
QQLMQPDFAE RLVAEVEASG VPPAALELEV TESGLMQDMA LAARHLDHLA RAGFRIAIDD
FGTGHSSLAY LKALPVSVLK IDRAFIRELH ANPADQRLTG TVIDMARHFE FITVAEGVEQ
EAQLERLIDM GCDLVQGFMF APPLKEDALF RLMKTGFAHM PVFGGAVA
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