| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1834 |
|---|
| Symbol | |
|---|
| ID | 7084257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 2055650 |
|---|
| End bp | 2056261 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643698857 |
|---|
| Product | DNA polymerase III, epsilon subunit |
|---|
| Protein accession | YP_002355482 |
|---|
| Protein GI | 217970248 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
|---|
| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.600995 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCGG TGGCGGTGAT CGACTTCGAG ACCACGGGGC TGTCGCCTGC GCAGGGCGAC
CGCGCGACCG AGATCGCCGC GGTGATCGTG CGGGACGGCC GGGTGGTGGA TCGCTACCAG
AGCCTGATGA ACGCGGGCGT GCGCATCCCG GCCCATATCG AATCCCTGAC CGGGATCTCC
AACGCGATGA TCCGCAGCGC CCCGACTGCG GCGCAGGTGA TGCGCGAGGT CGCGGACTTC
ATCGGCGGCA TCCCCATGGT CGCCCATAAC GCCGCATTCG ATGCGAAGTT CTGGGATGCC
GAGCTCGCTC GCATCGAGCG CGCGCGCAAG CAGGACTTCG TGTGTTCGCT GCTGCTGTCG
CGCCGCCTGT TTCCGCTTGC CCCCAGCCAC AGGCTCGGCG CACTGGTGGA GTACGCCAGG
CTGCCGGTCG CCGGCCGCTT CCACCGTGCG CTCGCCGACG CCGAGATGGC GGCCAGCCTG
CTGCTGCGCC TGGAAGAGGA GCTGCGCCAG CGCCACCGGG TCGCGCAGGT GTCGGTGGAG
CTGCTGTGTC GCATCCAGCG CGCCTCGAAG GCGCAACTGC CCAAGTGCCT GGCGGCTGCA
CGTGAAGGGT GA
|
|---|
| Protein sequence | MEAVAVIDFE TTGLSPAQGD RATEIAAVIV RDGRVVDRYQ SLMNAGVRIP AHIESLTGIS
NAMIRSAPTA AQVMREVADF IGGIPMVAHN AAFDAKFWDA ELARIERARK QDFVCSLLLS
RRLFPLAPSH RLGALVEYAR LPVAGRFHRA LADAEMAASL LLRLEEELRQ RHRVAQVSVE
LLCRIQRASK AQLPKCLAAA REG
|
|---|
| |