| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1819 |
|---|
| Symbol | miaA |
|---|
| ID | 7084241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 2041775 |
|---|
| End bp | 2042758 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643698841 |
|---|
| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| Protein accession | YP_002355467 |
|---|
| Protein GI | 217970233 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00239626 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTGCCTCCGC CCATCCCCGC CCCCCTGCCG CCCGCCCTGC TGCTGCTCGG CCCCACCGCC
AGCGGCAAGA CCGCGAGCGC GCTTGCGCTC GCGCAAGCCC TGCCGGTGGA GGTGATCAGC
GTGGATTCGG CGCTGGTGTA TCGCGACATG GACATCGGCA CCGCCAAGCC GAACGCGGAG
GAACGCGCGG TGTGCCCGCA CCACCTGATC GACGTGGTGA CGCCCGAGGA GAGCTATTCG
GCCGCACGCT TCCGCGCCGA CGCGATCCGC CTGATGGGCG AGATCGTCGC ACGCGGCAAT
ATTCCGCTCC TGGCCGGCGG CACCATGCTG TACTTCAAGG CGCTGCGCGA CGGGCTCTCC
GACCTGCCCG CGGCCGACCC CGAGCTGCGC CGCGCGCTCG ACGACGAGGC CGCCGGGCGC
GGCTGGCCGG CGCTGCACGC CGAGCTCGCC CGCCTCGACC CCGAGGCCGC GGCACGCCTG
GAGCCGGGCG ACGCGCAGCG CATCCAGCGC GCGCTCGAGA TCGTCCGCCT TACCGGCCGC
CCGCTCGCGG ACAGCTACGC GAAGAAGGAA GACGACCCGC TGCCTTGCCG GCTGCTGCCG
ATCGCGCTCG CGCCCTCGGA TCGCGGCGCG CTGCACGCGC GCATCGAGGA GCGCTTCGAC
GCCATGCTCC ACGCCGGCCT GGTCGACGAG GTTCGCCAGC TGCGCGCGCG CTACCGGCTC
GACCCGTCCA TGCCCTCGAT GCGCTGCGTC GGCTACCGCC AGGTGTGGGA ATACCTCGAC
GGCGGCACCG GCTACGACGA GCTGCGCTTC AAGGGCGTCG CCGCCACCCG CCAGCTCGCC
AAGCGCCAGC TCACCTGGCA GCGCCAGTTC CGCGAGACCT GGCCGGGCTT CGTCGAGCTC
GACTGCCTGC GCCCCGACCT CCCCGAGGCC GTGCTGCACA CCGCCTTGCG GCTGCTGCAC
GACCTTCCCC TGCATCCCGC CTGA
|
|---|
| Protein sequence | MPPPIPAPLP PALLLLGPTA SGKTASALAL AQALPVEVIS VDSALVYRDM DIGTAKPNAE
ERAVCPHHLI DVVTPEESYS AARFRADAIR LMGEIVARGN IPLLAGGTML YFKALRDGLS
DLPAADPELR RALDDEAAGR GWPALHAELA RLDPEAAARL EPGDAQRIQR ALEIVRLTGR
PLADSYAKKE DDPLPCRLLP IALAPSDRGA LHARIEERFD AMLHAGLVDE VRQLRARYRL
DPSMPSMRCV GYRQVWEYLD GGTGYDELRF KGVAATRQLA KRQLTWQRQF RETWPGFVEL
DCLRPDLPEA VLHTALRLLH DLPLHPA
|
|---|
| |