Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_1815 |
Symbol | |
ID | 7084237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 2036476 |
End bp | 2037642 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643698837 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_002355463 |
Protein GI | 217970229 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.100454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTCCA GCCGCCGCTT CGTCCTCTCG CTCAGCCTCG TCGGTCTCGC CGCGCTGGGC GCCTATGCCT GGTATGCAAA CCGTCCGCCG GCCTTGCCGC CGGGGGGCGC GCGGGCGCAG GCGGCAGGCG TGCAAGCGGT GCCGCCTGCG GCGGGGACTG CGGGCGCGAA GGGGGCCGCG GGCGCTGCGG GTGGCTCGCA GGGCGGGCCG GTGGTGGTGG AGACGCACAC CGTGGGCGTG CGTGCGCTCG CCGACGACGT CGGCGCGGTC GGCTCGCTGG TGTCGAACGA GTCGGTGGTG CTGCGTCCCG AGGTGTCGGG GCGGATCGAG GCGATCCGCT TTCGCGATGG CGAGGCGGTG CGGCGCGGCG AGGTGCTGAT CGAGTTCGAC GCCGCGGTGC AGCGCGCCGA GCTGCAGCAG GCGCGCGCCA GCCTGACCTT GGCCGAATCG AACTTCCGCC GCAGCCAGGA CCTCTTCTCG CGCAGCTTCG TGAGCCGCAG CAGCCTGGAC AACGCGCGCT CGCAGCTCGA GGTGGCGCGC GCCGGGGTGG CGCTCGCGCA GGCCAGGCTC GCGCGCATGC AGATCCGCGC GCCGTTTGCC GGCGTCGTGG GCATCCGCAG CGTGAGCCCC GGCGACTTCG TCAAGGACGG CGAGGCCATG ATCAACCTCG AGGACATCGC CACGCTGAAG GTGGATTTCC GCCTGCCCGA GCTCTACCTC GACCGTGTGC GCCCCGGGCA GACGGTGGAG ATCGCGAGCG ACGTGCTGGC GGGCGAGCGT TTCGCCGCCA CGGTCGAGGC GATCGATCCG CTGGTCGATG CGCAGGGGCG CGCGCTCAGG CTGCGCGCGA GCCTGCCCAA CCCCGAGCTG CGCCTGCGCC CGGGCGTGTT CGTACGCGTG CGCCTGATCC TCGCCGAGCG CGCCGACGTC GTGATGGTGC CCGAGGCCGC GCTGGTGCCG GCGCCGGGCA ACACCCAGTT CGTATACCGG GTCGCCGAGG GCAAGGCGCA GCGCGTCGAG GTGCGCACCG GCACGCGGCG CGACGCGATG GTGGAGGTGG TCGAGGGCGT GCAGGCGGGC GAGGTGGTGG TGACCGCCGG CCAGCTCAAG CTGCGCGACG GCGCGGCGGT GAAGCTGGCC GCGGGCGGCG TGGCGCGGGC GGACTGA
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Protein sequence | MPSSRRFVLS LSLVGLAALG AYAWYANRPP ALPPGGARAQ AAGVQAVPPA AGTAGAKGAA GAAGGSQGGP VVVETHTVGV RALADDVGAV GSLVSNESVV LRPEVSGRIE AIRFRDGEAV RRGEVLIEFD AAVQRAELQQ ARASLTLAES NFRRSQDLFS RSFVSRSSLD NARSQLEVAR AGVALAQARL ARMQIRAPFA GVVGIRSVSP GDFVKDGEAM INLEDIATLK VDFRLPELYL DRVRPGQTVE IASDVLAGER FAATVEAIDP LVDAQGRALR LRASLPNPEL RLRPGVFVRV RLILAERADV VMVPEAALVP APGNTQFVYR VAEGKAQRVE VRTGTRRDAM VEVVEGVQAG EVVVTAGQLK LRDGAAVKLA AGGVARAD
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