| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1778 |
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| Symbol | ispH |
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| ID | 7085748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 1999921 |
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| End bp | 2000859 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643698800 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_002355426 |
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| Protein GI | 217970192 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.534892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACA AGGAAATCCT GCTCGCCAAC CCGCGCGGCT TCTGCGCCGG GGTCGAGCGC
GCGATCGAGA TCGTCGAACG CGCCCTGAAG CGCTACGGCG CGCCGATCTA CGTGCGCCAC
GAGGTCGTGC ACAACAAGTT CGTCGTGGAC GACCTGCGCG CCAAGGGTGC GATTTTCGTC
GACGAACTCG ACGAGGTCCC TACCGGCAAT ACGGTGATCT TCTCGGCCCA TGGCGTCTCG
CTCGCGGTGC GCGAGGAAGC CGAGCGCCGC GGGCTGCGCG TCTTCGACGC CACCTGCCCG
CTGGTGACGA AGGTCCATGT CGAGGTGGCG CGCATGCGCG ACCAGGGCAA GGAGATCGTC
ATGATCGGTC ACAAGGGCCA CCCCGAGGTC GAGGGCACGA TGGGCCAGGT CGACGGCGGC
ATCCATCTGG TCGAGACCCC GGCCGACGTC GCCGGCCTGC AGGTGGCCGA CCCAGAACAG
CTCGCCTACG TGACCCAGAC CACGCTGTCC GTGGATGACG CGGCCGCGAT CGTCGATGCC
CTGCGCACCC GCTTCCCCCG GGTCGTCGGC CCGAAGAAGG ACGATATCTG CTACGCCACG
CAGAACCGCC AGGACGCGGT GAAGTTCATG ACCCCGTACG CGGACGTGGT ATTCGTGGTC
GGGTCGAAGA ACAGCTCCAA CTCCAACCGC CTGCGCGAGG TCGCCGCGCT GCGCGGCGTG
CCCGCCTACC TGATCGACAA CGCCGCCGGC ATCGACCCCG CCTGGATCGA GGGCAAGCGC
CGCATCGGCG TGACCGCGGG GGCCTCGGCG CCCGAGGTGC TGGTGGCCGA GGTGATCGCG
CGCCTGGAAG AACTGAGCGG CGGCGCGGTG CGCAACCTCG ACGGCGTGCC CGAGCGCGTG
ACCTTCGCGC TGCCCAAGGA GTTGCAGGAC CCGCGCTGA
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| Protein sequence | MNDKEILLAN PRGFCAGVER AIEIVERALK RYGAPIYVRH EVVHNKFVVD DLRAKGAIFV
DELDEVPTGN TVIFSAHGVS LAVREEAERR GLRVFDATCP LVTKVHVEVA RMRDQGKEIV
MIGHKGHPEV EGTMGQVDGG IHLVETPADV AGLQVADPEQ LAYVTQTTLS VDDAAAIVDA
LRTRFPRVVG PKKDDICYAT QNRQDAVKFM TPYADVVFVV GSKNSSNSNR LREVAALRGV
PAYLIDNAAG IDPAWIEGKR RIGVTAGASA PEVLVAEVIA RLEELSGGAV RNLDGVPERV
TFALPKELQD PR
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