| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1683 |
|---|
| Symbol | |
|---|
| ID | 7084103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 1890437 |
|---|
| End bp | 1891342 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643698704 |
|---|
| Product | PHP domain protein |
|---|
| Protein accession | YP_002355334 |
|---|
| Protein GI | 217970100 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0613] Predicted metal-dependent phosphoesterases (PHP family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTTC CGTCAGCCTC GCGGCTGCAC GCCCTCAACG TCGACCTGCA CTGCCATTCC
TCCGTCTCGG ACGGCTGGCT CGAGCCCGAA GCGCTGGTGT TGCGCGCGAT CGCCAACGGC
GTCGAGCTGC TCGCGCTGAC CGATCACGAC GAACTTGGCG GCATCGCGTC CGCGCAGCTT
GTCGCCCGCG CCCATGGCTT GGCCTTCGTG CCGGGCGTCG AGATCTCGGT CTCCTTCGCC
GGCGAGACCG TCCATATCGT GGGCCTGGGC GTCGATCCCG GGAGCGCCGA ACTGTGTGCC
GGTCTCGCCG CCCTGCGTGC CGGACGCGAC GGGCGCGCGC GGCGCATTGG CGACGAGCTC
GCGCGCGTCG GCATCCCCGA TGCCTTCGCG GGTGCCTGCC GCTTCGCGCG CAACCCCGCG
CTCGTGAGCC GCGCGCACTT CGCCCGCCAT CTGGTCGCGA GCGGCGTGAT GCCCGACGTG
AAGACGGTCT TCGACCACTA TCTCGTGCGC GGCAAGCCCG GCTTCGTCGA GCACCGCTGG
GCGACGCTCG AGCAGGCGGT GGGCTGGATC CGCGCCGCCG GCGGCATCGC GGTGGTCGCG
CATCCGGCGC GCTACCGGCT GTCCTCCGTC GCCATGGGCG AGCTCTTCGA CCGCTTCGTC
GCCGCCGGCG GTGAGGCCGT CGAGGTGGTG GCCGGCGCGC ACACCGAGGA CGAGATGCGT
CGCTTCGCGA GCCTCGCGCG CCAGCGCGGG CTGCTGGCCT CGCGCGCGTC CGATTTCCAT
GGTGTGCAGG AGAGCATGGT CGACGTCGGC CGCTGCAATC CGCTGCCTGC CGACCTCGAG
CCGGTGTGGA GCCGTCTGCA GGCCACCACC GCGGCGCTCG CGGCGGCCGC ATCCTCCGCG
CGCTAG
|
|---|
| Protein sequence | MSVPSASRLH ALNVDLHCHS SVSDGWLEPE ALVLRAIANG VELLALTDHD ELGGIASAQL
VARAHGLAFV PGVEISVSFA GETVHIVGLG VDPGSAELCA GLAALRAGRD GRARRIGDEL
ARVGIPDAFA GACRFARNPA LVSRAHFARH LVASGVMPDV KTVFDHYLVR GKPGFVEHRW
ATLEQAVGWI RAAGGIAVVA HPARYRLSSV AMGELFDRFV AAGGEAVEVV AGAHTEDEMR
RFASLARQRG LLASRASDFH GVQESMVDVG RCNPLPADLE PVWSRLQATT AALAAAASSA
R
|
|---|
| |