| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1636 |
|---|
| Symbol | |
|---|
| ID | 7084846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 1834321 |
|---|
| End bp | 1835202 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643698656 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002355287 |
|---|
| Protein GI | 217970053 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0682981 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTCC GCCGCATCCC GCCCATCCAG TGCCTGCTCA CCTTCGAGGC GGTCGCGCGC
CTGCGCAGCG CGAGCCGTGC GGCCGAGGAG CTCTGCGTGA CCGTCAGCGC GGTCAGCCAT
CGCCTGCGCC AGCTCGAGTC CCATCTGGGC GTGCGGCTCT TCTCGCGCAG CGACTTCACC
CCGACCGCCG AGGGGGCGGC CTACCTGCAG CAGGTCGGTG TCGCGCTCGC GGCGCTGCGC
GAATTGCCGG GCGAGCGCGC GCCGGGTGCA TCGGCGCGCT TGCGCGTGGC GGTGACACCC
TCGTTCTGCC GACAGTTCGT CATGCCCAAG CTCGAGCTCT TCCGCCGCGA CTGGCCGGAC
ATCGAGCTCA CCCTGCAGGT GTCGATCCCG CTGCGCGACG TCGTCGCGGA AGAGGCGGAG
CTCGAGATCC GCTATGGCGC CGGGGGCTAC ACCGACCTCG AGCACCGCCT GCTGCTGAGC
GACGAGGCGG TCCCCGCCTG CAGCCCGGCC TTCCTCGACG AGCACGGCCC CTTCGACGGT
TTCGCGAGCC TCGCCGAGTG TGCCGGCACC GCGCTGGTGC GCAGCCCGCT CGAGCCCTGG
TCGAACTGGT TCGCGCACTG CGGCCTGGCC CTGCCCGAGC CGGCGCGCGG CGCACAGTTC
AACGACCTCG GCCTGGCCTA CGATGCCGCG GCGAGCGGCT TCGGGGTCGC CCTGGTGCGC
CAGCGCCTGG GGGCGGCGTG GTTCGACAGC GGGCGCCTGC TGGCGTTGTC CTCGCGCCCG
CTGCGCTCGC CCTACGCGCA CTACCTGTGC TGGCGCCCCG GCGCGCTCGA GCGCTGGGAG
TGCGCCGCGT TCGCGGACTG GCTGCAGGCC GCGCTGCCCT GA
|
|---|
| Protein sequence | MALRRIPPIQ CLLTFEAVAR LRSASRAAEE LCVTVSAVSH RLRQLESHLG VRLFSRSDFT
PTAEGAAYLQ QVGVALAALR ELPGERAPGA SARLRVAVTP SFCRQFVMPK LELFRRDWPD
IELTLQVSIP LRDVVAEEAE LEIRYGAGGY TDLEHRLLLS DEAVPACSPA FLDEHGPFDG
FASLAECAGT ALVRSPLEPW SNWFAHCGLA LPEPARGAQF NDLGLAYDAA ASGFGVALVR
QRLGAAWFDS GRLLALSSRP LRSPYAHYLC WRPGALERWE CAAFADWLQA ALP
|
|---|
| |