| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1628 |
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| Symbol | |
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| ID | 7084838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 1823370 |
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| End bp | 1826144 |
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| Gene Length | 2775 bp |
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| Protein Length | 924 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643698648 |
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| Product | PEP-CTERM system TPR-repeat lipoprotein |
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| Protein accession | YP_002355279 |
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| Protein GI | 217970045 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | [TIGR02917] putative PEP-CTERM system TPR-repeat lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.57702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTACCC GACCCGAACG TCGCGCAGTG CGCACGATGA CGCTCTGCGC CACGCTCCTG
CTCGCCGCCT GTGGCGACAG CGGCAGCCCA CAACACTACG TCGCACTCGC CCGCGACCAC
CTTGCCAACG GCGCCTATCG CGAAGCGACC ATCGAGCTGA ACAACGCACT CCAGAAGGAT
CCGAAGAACC GCGAGGCACG CTGGCTGCTG GCGCAGGCGG CGCTCCAGCT CGGCGAAGCC
GACAAGGCCG AACGCGATGC ACGCAAGGCG ATCGAATACG GGTTCTCGCG CACCGAAGCC
CTACCCCTGC TGGCGCGGGC GATCCTGATG CAGCAGGCGC CCGACCGGGT TCTCACCGAA
CTCTCCACCG CCCCGACGGA CGCGCCCGAC ACAATGCAAG CCGAGTATGC AAGTCTGCGT
GGCACCGCGC TCCTGCTCAA GGGAGAACTC GACGCTGCCG AGCCCGAGTT CGGCAAGGCG
CACAAGCTGG ACCCCGCCCT GCCGGAGGCC ATCGTCGGCC TCGCGCTGGC GCAGAGCTTG
CGCAAGCAGT ACGACGAGGC GCGCAAGACG CTTGCACCCG CATTAGAGCG CACGCCGCCG
GTCGCCGACG CGTGGTCGCT GCTCGGCGAC ATTGAAACCG AGCAGGAGCG CTTCGACGCC
GCCGAGACCG CCTTCGGCCA GGCGATCCGG GCGCGTGCCC ATGTCACCCT CGAGCGCGCG
AAGCGCGCCC TCGCCCGCGT GCGCCAAGGC AAGTTCGCAG AGGCCGAGGC GGACCTGAAC
GCACTCGGAG CGCTTTCTCG CCATCCCTAT GCGCAGTACG TCACCGGCCT GTCCCATTTC
CGCCAGCAGC GCCTGCGCGA GGCGGCTGAC GCATTCGAAC TTTCCTTGGC CGCCGATCCG
AATTTCGCAC CCAACCGGGT CTATCTCGCC ATCACCCGGC TGATGCTCGG CCAGCAGGAA
CAGGCGCTGG CGCACGCCGA ATTCATCCGT GCTGCCGCAC CGCAGGCTTC GGGCGCGAAC
CTGCTCCTCG GCATCGCCCA GGCTGGTCAC GCCGACTACG GCCAGGCGCG CAAGACGCTC
GAAGCCGCCT TGGCCTCCGA GCCGGACAAC GTCACCAATT TGCAGTTGCT GGCCACGCTG
AGCCTGCTGC AGGGCGACAG CAAGACCGCA CTCTCCCATG CCCAGCGTCT CGCCACGCTG
CGTCCGGACT CGACGGGCGC CATCAACCTT TTAATGATGG CGCAGTTGAT GTCGGGTGCG
GAAGTGCCCG AGCCGACCGC CGGTCAGGTC GATGCGCTCC AGGCCGAGTT CATGCAGGCC
CTCGAGGCCT TCCGCGACAA GCGCTTCGGC GAAGCGACAA AGCGCGCCGA GGCCCTGCGC
GCAGCGCATC CCGAACAGAT CGGGCCGATC AACCTGCTCG CCGCCCTGTA TCTTTCCACC
GGCCAGTGGC CCAAGGCGCG CAAGGAACTC GAGACCGTCC TGCAACGCCA GCCCGCGGAT
GCGACCGCAC GCATCAACCT CGCCAAGCTC GAACTGCAAG ATCGCAACTT CCAGCGCATT
AAGGAGCTCG TGAGCCCGCT CGTGCTCGCG TCGCCTTCGG CGGAAGCGCC CGCGCTCCTG
CTTGTGGCCG CCGAGCATGG GCTGCAGAAC GACGTCGCCG CGGACCAGGT GCTTGAGCAG
TTGGTCAAGA GCAACCCCTC GGCCACGCTT GCACGTGCCC TGGCCGCAGG CCGTGCGCTA
CGAGGCAACA AGCCGGAACG CACGCTCGAA TACCTTGCCC AGTTCGACAA GGCACGCATC
GAGTCCTCGC CGGCGCTCCT CGAACTGCGC GGGCGCGCTC ACCTGGCCCT CGCCCAGAAC
GCCGAAGCCC TCGGCAACTT CGAGCGCTGG GCGCACTTGG CCCCCGAATC CGCTGCAGCG
CACTTCCTGC ATGCCGAAAC CCTCGCTCGC CTGGGACGCA TCCGTGACGC CGAGGGCGCG
CTGGTCCGGG CCGTCAAGCT CGACCCGACC AACCCCGAGG TGCGCATCGC CGAGGTACGC
ATGCTGACCC GGACGGGACA ACTCGACAAG GCAAAGAGCG CTGCGCAGCG CCTGCGCAAG
GATTTCGGCG ACCGCCCGGA CATCCTCGCC ACCACCGGCT GGCATGCATT GATGACCAGC
GAGTTCGCCA TCGCGGCCGA CCACCTCGGG CGTGCATTCG CGCAGACGCC GAGCACAGCC
CTCCTCCTCG AGAGGATGGC CGCGTTGTGG GGCATGGAGA AGCGGGATGA AGCCCTCGCG
CTCATCCGGG ACTGGCTGGC CGAACACCCG CAGGACAGCG CAGCGCTGCT CCAGCTTGCC
GGCGCATATC TGGAGCTCGG CCAGGACGAG GAGGCAGTCC GCATCTATCG CAAGGTGCTG
GAGCTCGACC CGGCGCACGT CCCGTCGCTC AACAACGTCG CTTGGCTGTT GCGCCGCAGC
CGGCCGGACG AAGCCCTTCA AACGGCCCGT CGCGCCCTCG AGCTTGCCCC CAAGGACCCG
AACGTGCTCG ATACCGTCGG CATGTTGTAT CTGGACCGCA GGGACCTGAC GCAGGCAGGG
TGGTACGTCG GCAAGGCGCA TGAGCAGAAC CCGCGCAACC ACCAGATCAG CCTGCACCTC
GCCGAGGTCG CACACGCCAA GGGCAACACC GCAGAGGCGC TCAAGCTCAT CGACGGCGTG
CTTGCAGAGG CGCGCGATCC TGCACTTCAC AAACAGGCCG AGAGCCTGCG TGCAACGCTC
GAGAGCGGGC GCTGA
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| Protein sequence | MPTRPERRAV RTMTLCATLL LAACGDSGSP QHYVALARDH LANGAYREAT IELNNALQKD
PKNREARWLL AQAALQLGEA DKAERDARKA IEYGFSRTEA LPLLARAILM QQAPDRVLTE
LSTAPTDAPD TMQAEYASLR GTALLLKGEL DAAEPEFGKA HKLDPALPEA IVGLALAQSL
RKQYDEARKT LAPALERTPP VADAWSLLGD IETEQERFDA AETAFGQAIR ARAHVTLERA
KRALARVRQG KFAEAEADLN ALGALSRHPY AQYVTGLSHF RQQRLREAAD AFELSLAADP
NFAPNRVYLA ITRLMLGQQE QALAHAEFIR AAAPQASGAN LLLGIAQAGH ADYGQARKTL
EAALASEPDN VTNLQLLATL SLLQGDSKTA LSHAQRLATL RPDSTGAINL LMMAQLMSGA
EVPEPTAGQV DALQAEFMQA LEAFRDKRFG EATKRAEALR AAHPEQIGPI NLLAALYLST
GQWPKARKEL ETVLQRQPAD ATARINLAKL ELQDRNFQRI KELVSPLVLA SPSAEAPALL
LVAAEHGLQN DVAADQVLEQ LVKSNPSATL ARALAAGRAL RGNKPERTLE YLAQFDKARI
ESSPALLELR GRAHLALAQN AEALGNFERW AHLAPESAAA HFLHAETLAR LGRIRDAEGA
LVRAVKLDPT NPEVRIAEVR MLTRTGQLDK AKSAAQRLRK DFGDRPDILA TTGWHALMTS
EFAIAADHLG RAFAQTPSTA LLLERMAALW GMEKRDEALA LIRDWLAEHP QDSAALLQLA
GAYLELGQDE EAVRIYRKVL ELDPAHVPSL NNVAWLLRRS RPDEALQTAR RALELAPKDP
NVLDTVGMLY LDRRDLTQAG WYVGKAHEQN PRNHQISLHL AEVAHAKGNT AEALKLIDGV
LAEARDPALH KQAESLRATL ESGR
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