Gene Tmz1t_1622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1622 
Symbol 
ID7084832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1816784 
End bp1818025 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content67% 
IMG OID643698642 
Productprotein of unknown function DUF214 
Protein accessionYP_002355273 
Protein GI217970039 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCAGA TCGCCGTCGG CCGGCTCCGA CTGGCCTTTT CCTTGGCCGC CCGCAACCTC 
TTCAGGCAGC GTCGGCGTGC GTTGCTCGCG CTCGCGATCA TCAGCGGTGG GGTGATCACC
TTCCTGCTGG CTGGCGGCTT CATCCACTGG TTGCTCGGCA ACATGCGCGA GGCGACGATC
CACTCGCAGC TCGGCCATGC CCAGATCATC CGCCCGGGCT ATTTCCGCGA GGGGCTCGGC
GATCCCTACC GCTATCTGCT GCCGCCCGGC ACCTCGGCCG TAGAGGCACT TTCGCTCAGG
GGGCTGCGCA CGGTTTCACC GCGTCTGGCA TTCAACGGTC TGCTGTCGAG TGGCGACACG
ACGGTGAGCT TCATGGGCGA GGGCATCGAT CCTGTGCGGG AGACGGCGAT CATGCGTTCG
ATCCGGATCG TGCGGGGTCG CAACCTGCAG GTCGCCGACG AACAGGCGGC CATCATCGGG
GCCGGGCTTG CCGCCAACGT GGGCGTCGAA CCGGGGGACC GCATCGTGCT GCTGGCGACG
GGCGCGTCCG GCGGACTGGG CGCGGTCGAA CTCGAGGTCG CCGGCCTGTT CGCCACCACC
GCGAAGGCCT ACGACGACGC CGCGCTGCGG GTGCCGATCG AGGTCGCCCG CAAGCTGATG
GGGGTGGATG GCGCGACGAG TTGGGTGGTG CTGCTCGAGG ACACCGACGG CACGGCGTCG
GCAGTGGCAA GCCTGCGCGC TGGACTCGCC GCCGAATCCT TCGAAGTCAT TCCCTGGCAC
GATCTCGCCG ACTTTTACAA CAAGACGGTC GAACTGTTCA CCCGCCAAGT GGGGGTCGTG
CGGCTGCTGA TCGCCTTTAT CGTGGTGCTG AGCATCTCTA ACACGTTGTC CATGGCGGTG
TTCGAGCGCA CCAGCGAGAT CGGCACGGTG ATGGCGCTCG GCACCCGCCG ACGTGGCGTG
CTCGCCATGT TCATCACCGA AGGCGCCCTG CTCGGCGTGC TCGGCGGCGT TCTCGGCGTC
ACCCTGGGCA GCCTACTGGC GCTTGTCATT TCGTACGTTG GCATCCCGAT GCCGCCTCCG
CCGGGCATGG ACATCGGCTT CACCGGGCGC ATCTCGGTGT CGCCTGCGCT CGCACTCGAT
GCCTTCGTAC TGGCCTTCCT GACCACGCTG CTGGCGAGCG TCATGCCGGC GCTGCGGGCG
TCGCGGATGA ACATCGTCGA CGCGCTGCGT CACCAGAGGT GA
 
Protein sequence
MQQIAVGRLR LAFSLAARNL FRQRRRALLA LAIISGGVIT FLLAGGFIHW LLGNMREATI 
HSQLGHAQII RPGYFREGLG DPYRYLLPPG TSAVEALSLR GLRTVSPRLA FNGLLSSGDT
TVSFMGEGID PVRETAIMRS IRIVRGRNLQ VADEQAAIIG AGLAANVGVE PGDRIVLLAT
GASGGLGAVE LEVAGLFATT AKAYDDAALR VPIEVARKLM GVDGATSWVV LLEDTDGTAS
AVASLRAGLA AESFEVIPWH DLADFYNKTV ELFTRQVGVV RLLIAFIVVL SISNTLSMAV
FERTSEIGTV MALGTRRRGV LAMFITEGAL LGVLGGVLGV TLGSLLALVI SYVGIPMPPP
PGMDIGFTGR ISVSPALALD AFVLAFLTTL LASVMPALRA SRMNIVDALR HQR