| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1583 |
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| Symbol | |
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| ID | 7084787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 1762601 |
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| End bp | 1766125 |
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| Gene Length | 3525 bp |
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| Protein Length | 1174 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643698600 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_002355237 |
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| Protein GI | 217970003 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.422448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCTG CTGCCCCCTC CACGGCCGAA GCGCCCATCG TGCCGAGCGC TCCGCGCTTC
GTGCATCTCC GCCTGCACTC CGAATATTCG ATCACCGACG GCATCGTCCA GCTCGACCAG
GCGATCGCCG CCGCCGCGGC CGACGGCATG CCGGCGCTCG GCGTCTCCGA TCTCGCCAAC
CTGTTCGGCA TGGTCAAGTT CTACAAGGGC GCGCGCGGCA AGGGCATCAA GCCCATCGTC
GGCGTCGACG CCTGGATCCG CAACGAGGCC GAGCGCGACA AGCCGCAGCG CGTGCTGCTC
ATCTGCAAGA ACCGCGCGGG CTATGGTCAG CTGTGCGAGC TGCTGACGCG CGCCTACCTC
GAGAACAAGC ACCGCGGCCG CGCCGAGATG CGCCGCGAGT GGTTCGAGAA TGGTGCCGCA
AGCGCGCTGC TGTGCCTGTC GGGTGCGATG AGCGGCGACA TCGGCGCGGC GATCGCGGCC
GGCAACCTCG CGCTCGCCGA ACAGCTCGCG GCCGACTGGG CGCGGCTGTT TCCGGACGCC
TTCTACATCG AGATCCAGCG CGCCGGGCAT CCCGGCACCG AGTCCTACAT CCGCCACGCG
GTGGAACTCG CCGGCCGGCT CGGCCTGCCG GTGGTGGCGA CCCACCCGGT GCAGTTCCTC
AAGCGCGAGG ATTTCAAGGC ACACGAGGCG CGCGTCTGCA TCGCGCAGGG CTACGTGCTC
GCCGACAAGC GCCGGCCGCG CGACTTCACC GAGGAGCAGT ACCTCAAGAG CCAGGCGGAG
ATGTGCGAGC TCTTCGCCGA TCTGCCCGAG GCGCTCGAGA ACGCGGTCGA GATCGCGCGC
CGCTGCTCGC TCACCGTGCA ACTCGGCAAG AACTTCCTGC CCTTGTTCCC GACGCCCGAG
GGCATGACGC TCGACGACTT CCTCGTCGCG GAGGCGAAGA AGGGGCTGGA GGAGCGCCTC
GCCCAGCTCT ACCCGCACCC GGAGGAGCGC GAGCGTCAGC GCCCGCGCTA CGAGCAGCGG
CTGAAGTTCG AGACCGACAC CATCATCCAG ATGGGCTTCC CCGGCTACTT CCTGATCGTG
GCCGACTTCA TCCAGTGGGG CAAGAACAAC GGCGTGCCGG TCGGACCGGG GCGGGGCTCC
GGCGCGGGCT CGCTGGTGGC CTACTCGCTC AAGATCACCG ACATCGACCC CCTCGAGTAC
GCGCTGCTGT TCGAGCGCTT CCTCAACCCC GAGCGGGTGT CGATGCCCGA CTTCGACATC
GACTTCTGCC AGGACAACCG CTACCGCGTC ATCGAGTACG TGCGCGAGCG CTACGGCAAG
GACGCGGTGA GCCAGATCGC CACCTTCGGC ACCATGGCCT CGAAGGCGGT GGTGCGCGAC
GTCGGCCGCG TGCTGGATCT GCCTTACGGC CTGTGCGACC GCCTCTCCAA GCTGATCCCG
ATCGAGGGCG CCAAGCCCGT CTCGCTGAAC AAGGCCTACG AGATGGAGCC GCAGATCGGC
GAGATGATGG CCGACGGCAA CGACGGCGAG TCGGTGCGCG ACCTGTGGAG CCTGGCGCAG
CCGCTGGAGG GCTTGAGCCG CAACGTCGGC ATGCACGCCG GCGGCGTGCT GATCGCGCCC
GGCAAGCTCA CCGACTTCTG TCCGCTCTAC ATCGCCGACG GCGACGACGC CACGCCGGTG
TCGCAGTTCG ACAAGGACGA CGTCGAAGCC GTGGGCCTGG TCAAGTTCGA CTTCCTCGGC
CTGCGCAACC TGACCATCAT CGAGCTCGCG CTGGAGTACG TGGCGCGCCT GGAGGGCAGC
CGTCCGGACC TGATGAGCCT GGGCTTCGAG GATCCCGCCG CCTACCAGAT CCTCAAGGAC
GCCAACACCA CGGCGATCTT CCAGGTCGAA TCGGACGGCA TGAAGAAGCT GCTCAAGAAG
CTCGCGCCCG ACCGCTTCGA GGACATCATC GCGGTGCTCG CGCTCTACCG TCCCGGCCCG
CTCGGCTCGG GCATGGTGGA CGACTTCATC CTGCGCAAGA AGGGCCAGCA GGAGATCGAC
TACTTCCACC CCGACCTCAA GGCCTGCCTG GAGCCGACCT ACGGCGTGAT CGTGTACCAG
GAACAGGTGA TGCAGATCTC CCAGATCATC GGGGGCTACA CGCTTGGCGG TGCCGACATG
CTGCGCCGCG CGATGGGCAA GAAGAAGGCC GACGAGATGG CCAAGCACCG CGCCACCATC
GCCGAGGGTG CGAAGCAGAA GGGCTATGAC CCGGCGCTCG CCGAGCAGCT CTTCGACCTG
ATGACCAAGT TCGCGGAGTA CGGCTTCAAC AAGTCGCACA CCGCGGCCTA CGCGGTGGTC
ACCTACCACA CCGCCTGGCT CAAGGCGCAC CACTGCGCGG CCTTCATGGC GGCGACGATG
TCGTCCGACC TGGACAACAC CGATACCGTC AAGATCTTCT ACGAAGACAC GCTCGCCAAC
GGCATCAAGG TGCTGCCGCC GGATGTCAAC GCCTCCGACT ACCGCTTCGT GCCGGTGGAT
CGCAAGATCA TCCGCTACGG CCTGGGCGCG GTGAAGGGCG TGGGCGAGCC TGCGGTGCGC
GCGATCCTCG CCGCGCACGA GAAGGGCGGA GACTTCCGCG ACCTGTTCGA TTTCTGCGAG
CGCGTCGATC GCCGCATGGT AAACCGCCGC GTCATCGAGG CGCTGATCCG CGCCGGCGCG
ATGGACACCC TGCCGGGCCA CAAGGGCCTG GACCGCGCGC AGCTGATGGC GACCGTCGCG
CTGGCGATGG AGGCGGCCGA ACAGGCGGCG GCCAACGCGA TGCAGGGTGG GCTCTTCGAC
CTGATGCCGG AGGCCGCGGG CGCGGCGCCC GAGTTCGCCA AGGTGCGTGC GTGGACCGAG
CGCGAGCGCC TCAAGGAAGA GAAGCTCGCG ATCGGCTTCT TCCTCTCCGG CCATCCCTTC
AACGCCTTCA AGCCCGAGGT GCGCCGCTTC GTGCGCCGCA CGCTGGCGCA GCTCGAGCCC
TCGCGCGACA TCACCATGCT GGCCGGCGTG GTGATGGAGC AGCGCACCAA GGTCGGCAAC
CGCGGCAAGA TGGCCTTCGT GCTGCTCGAC GACGGTACCG AGCCGCGCGA GGTCACGGTG
TATTCCGAGG TGCTGGAGGC GAGCCGCGGC AAGATCGTCA CCGACGAGGT GCTGGTGGTG
GAGGCCAAGG TGAGCAACGA CGATTTCTCC GGTGGCCTGC GCATCAACGC CGACCGCCTG
CTCACCCTCG GCGAGGCGCG CAGCCGTTTC GCACGCGCGC TGTCGCTACG CATCGACGGC
GAGCTTGCCG CCAGCGGCGG TGCGGCGGGC GCGGCCGGCA AGCTGCAGAC CCTGCTCGAG
CCCTTCCGCG AGGGCGGCTG CCCGATCCGC GTCCGCTATC GCAACGCCGC CGCCGAAGCC
GAGCTCCCGC TCGGCGACGG CTGGCGCGTG CGCCTGGACG ACGCGCTGCT GGAGAGCCTG
CGCGAATGGC TGCCGGGCGA GGCGGTCGAG GTGGTGTACC CCTGA
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| Protein sequence | MNPAAPSTAE APIVPSAPRF VHLRLHSEYS ITDGIVQLDQ AIAAAAADGM PALGVSDLAN
LFGMVKFYKG ARGKGIKPIV GVDAWIRNEA ERDKPQRVLL ICKNRAGYGQ LCELLTRAYL
ENKHRGRAEM RREWFENGAA SALLCLSGAM SGDIGAAIAA GNLALAEQLA ADWARLFPDA
FYIEIQRAGH PGTESYIRHA VELAGRLGLP VVATHPVQFL KREDFKAHEA RVCIAQGYVL
ADKRRPRDFT EEQYLKSQAE MCELFADLPE ALENAVEIAR RCSLTVQLGK NFLPLFPTPE
GMTLDDFLVA EAKKGLEERL AQLYPHPEER ERQRPRYEQR LKFETDTIIQ MGFPGYFLIV
ADFIQWGKNN GVPVGPGRGS GAGSLVAYSL KITDIDPLEY ALLFERFLNP ERVSMPDFDI
DFCQDNRYRV IEYVRERYGK DAVSQIATFG TMASKAVVRD VGRVLDLPYG LCDRLSKLIP
IEGAKPVSLN KAYEMEPQIG EMMADGNDGE SVRDLWSLAQ PLEGLSRNVG MHAGGVLIAP
GKLTDFCPLY IADGDDATPV SQFDKDDVEA VGLVKFDFLG LRNLTIIELA LEYVARLEGS
RPDLMSLGFE DPAAYQILKD ANTTAIFQVE SDGMKKLLKK LAPDRFEDII AVLALYRPGP
LGSGMVDDFI LRKKGQQEID YFHPDLKACL EPTYGVIVYQ EQVMQISQII GGYTLGGADM
LRRAMGKKKA DEMAKHRATI AEGAKQKGYD PALAEQLFDL MTKFAEYGFN KSHTAAYAVV
TYHTAWLKAH HCAAFMAATM SSDLDNTDTV KIFYEDTLAN GIKVLPPDVN ASDYRFVPVD
RKIIRYGLGA VKGVGEPAVR AILAAHEKGG DFRDLFDFCE RVDRRMVNRR VIEALIRAGA
MDTLPGHKGL DRAQLMATVA LAMEAAEQAA ANAMQGGLFD LMPEAAGAAP EFAKVRAWTE
RERLKEEKLA IGFFLSGHPF NAFKPEVRRF VRRTLAQLEP SRDITMLAGV VMEQRTKVGN
RGKMAFVLLD DGTEPREVTV YSEVLEASRG KIVTDEVLVV EAKVSNDDFS GGLRINADRL
LTLGEARSRF ARALSLRIDG ELAASGGAAG AAGKLQTLLE PFREGGCPIR VRYRNAAAEA
ELPLGDGWRV RLDDALLESL REWLPGEAVE VVYP
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