Gene Tmz1t_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1578 
Symbol 
ID7084782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1755224 
End bp1756345 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content70% 
IMG OID643698595 
Productprotein of unknown function UPF0118 
Protein accessionYP_002355232 
Protein GI217969998 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.373133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGACC AGGTCGCGGA GAAGGTCGTC CGCCGCGTCA TCCTCGGCTT CCTGCTCGGC 
GGCCTGCTGT TGCTGAGCTA TGCGGTGCTG CACCTGTTCA TCGTGCCGGT GGCGTGGGCG
GTGATCATCG CCTATGCCAC GTGGACGCCT TACCGCCAGC TGCGCTCGCG GTTACCGCGC
TATCCCACGA TCAGCGCGCT GCTGATGACG CTTTTGCTGA GCGCCGCCTT CGTGCTGCCC
GCGCTGTGGA TCGGCATGCT GCTGCGCACC GAGGTCGGTG TCGCGATCGC CGCGGTGACC
GCGCAGATCC GCGAGGGCGC CTTCGTGCTG CCCGAGTTCG TCCGCACGCT GCCGTGGATC
GGCGACGACC TGCAGGCGAT GGTGGGCGAG CTCACCCGCG AGCCGGAGGC GCTGCGCGCG
CAACTCACCG AGTGGGTGCG CCAGGGCAGC GACCTCGCGC TGACGCTGAT CGGCGACGTC
GGGCGCAACG CGGCCAAGCT GGGTTTCGCA CTCATCACCG TGTTCTTCCT CTACCGCGAC
GGCGAGCGCG TGCTCGAGCA GGTGGTGGCG GTGCTGCGCC GCTTCCTCGG CGAGCGCCTG
GACCCCTATC TCTCCGCGGT GGGCGGGATG ACCAAGGCGG TGGTGTGGGG CCTGATCGCG
ACCGCGATCG GCCAGGGTTT CGTCGCCGGG CTGGGCTACT GGTGGGCGGG CGTGCCGGCA
CCGGTGCTGA TGGGGGCGAT CACCGCCGTG ATCGCGATGA TCCCCTTCGG CACGCCCTTC
GCGTGGGGCT CGATCGGCGC CTGGCTGCTG CTCACCGGCA ACACCGTCGA GGGCATCGGG
CTGCTGCTGT GGGGCGCGCT GGTGGTGAGC TGGGTGGATA ACCTGGTGCG TCCGCTGGTG
ATCAGCAATG CCACCCGCAT CCCCTTCCTG CTGGTGATGT TCGGCGTGCT CGGCGGGCTG
TCCGCGTTCG GGCTGGTCGG CCTGTTCCTC GGGCCGGTGG TGCTGGCAGT GCTGATGGCG
GTGTGGGGCG AGTGGCTGGA GGAGTCGGAG TTCGCGCGCC TTGCGGCGAT CGGAGCGCCC
GCGGGCGCGA GGGAGGAGGT GGAGCGCGGC GGTCGGTCCT GA
 
Protein sequence
MIDQVAEKVV RRVILGFLLG GLLLLSYAVL HLFIVPVAWA VIIAYATWTP YRQLRSRLPR 
YPTISALLMT LLLSAAFVLP ALWIGMLLRT EVGVAIAAVT AQIREGAFVL PEFVRTLPWI
GDDLQAMVGE LTREPEALRA QLTEWVRQGS DLALTLIGDV GRNAAKLGFA LITVFFLYRD
GERVLEQVVA VLRRFLGERL DPYLSAVGGM TKAVVWGLIA TAIGQGFVAG LGYWWAGVPA
PVLMGAITAV IAMIPFGTPF AWGSIGAWLL LTGNTVEGIG LLLWGALVVS WVDNLVRPLV
ISNATRIPFL LVMFGVLGGL SAFGLVGLFL GPVVLAVLMA VWGEWLEESE FARLAAIGAP
AGAREEVERG GRS