Gene Tmz1t_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1553 
Symbol 
ID7083635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand- 
Start bp1729833 
End bp1730435 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content64% 
IMG OID643698570 
ProductTripartite ATP-independent periplasmic transporter DctQ component 
Protein accessionYP_002355207 
Protein GI217969973 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACACCC TCCTCCGAAT TTCACACGGC ATCGATGCCG TAAGCCGATT CTTCGGCAAG 
TTCATCATCT GGCTCGTGCT CGCCGCCGCG CTGATCAGCG CCGGAAACGC CGTCGCGCGC 
AAGGCCTTCA ACATCGGCTC GAACGCTTTC CTCGAGATCC AGTGGTATCT CTTCGGCGCG 
GTCTTCCTGC TCGGCGCCGG CTACACCTTC CTGCAGAACG CCCACGTCCG CATCGACGTG 
CTCGCGAGCA AGCTGTCGAT GCGCACGCGG ATGGTCATCG ACATCGCCGG AATCATCGTG 
TTTCTGCTGC CGCTGTGCTG GTTCATGATC CAGTTCGCGT GGCCGGTGGT GGTGGGCGCC 
TACGCTTCGG GAGAGATGTC GTCGAACGCC GGCGGCCTGA TCCGCTGGCC GGTGTATGCC 
CTGGTGCCGT TCGGCTTCGC GCTGCTCGGC CTGCAGGCGA TCTCGGAGCT GATCAAGCGC 
TTCGCCTTCC TGCAGGGCAA GGCGCCCAAC CCGCTGCTGC ACGGTGCGCA CGAGAGCAAC 
GAGGCGCACG ACGCCGAACA CGCCCAACCC AATCATGACG ACGCCGGCGA GGTGCGGAAA 
TGA
 
Protein sequence
MDTLLRISHG IDAVSRFFGK FIIWLVLAAA LISAGNAVAR KAFNIGSNAF LEIQWYLFGA 
VFLLGAGYTF LQNAHVRIDV LASKLSMRTR MVIDIAGIIV FLLPLCWFMI QFAWPVVVGA 
YASGEMSSNA GGLIRWPVYA LVPFGFALLG LQAISELIKR FAFLQGKAPN PLLHGAHESN 
EAHDAEHAQP NHDDAGEVRK