| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1552 |
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| Symbol | |
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| ID | 7083634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 1728025 |
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| End bp | 1729836 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643698569 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_002355206 |
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| Protein GI | 217969972 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGAAC TCTTCACCGC CCACGCTCCC GAACTGATGT TCGGGTCGCT GCTGCTCTTC
CTGCTCACCG GCTTCCCGGT CGCCTTCGCC CTCGCCGCCT GCGGGCTGCT GTTCGGCTTC
ATCGGCGTCG AGATCGGCCT GTTGTCGCCC AGCATCTTCC AGGCGCTGCC GCTGCGCGTC
TTCGGCATCA TCCAGAACGA CACCCTGCTC GCGATTCCCT TCTTCACGCT GATGGGCCTG
GTGCTCGAAC GCAGCGGCAT GGCCGAGGAG CTGCTCGACA CCGTCGGCCA GGTGTTCGGG
CCGATCCGCG GCGGGCTCGC GCTGGCGGTG ATCTTCGTCG GCGCCCTGCT CGCGGCGACC
ACCGGCGTGG TCGCCGCCGC GGTGATCTCG ATGGGCCTGA TCTCGCTGCC GATCATGCTG
CGCTACGGCT ACAGCCCTGC GATCGCGAGC GGCGCGATCA CCGCCTCGGG CACGCTGGCG
CAGATCGTGC CCCCCTCGCT GGTGCTGATC GTGATCGCCG ACCAGCTGGG CCGCAGCGTC
GGCGACCTCT ACAAGGGCGC CTTCATCCCG GCCTTCATGC TGATCGGCCT GTATGTGCTG
TTCATCATCG GCCTGGCGAT CTTCAAGCCT GCCATGGTCC CCGCCCTGCC GCCCGAGGCG
CGCACCTACC GCGAGCCGGA CGGCAGCTCG GGCATGCGCT CGCTCGGCGT GTTCACCGTA
TTCGTCACCG TCGTCGCGGT CACCTTCGGC ATGTACTACG GCGAGATCCT GTCCGCCCTC
AAGGGCGCCG AGGTCAAGCC GGCGATGGAC GAGACCATCG TCGTGGCACT CACCGGCGGC
ACCCTGTTCG CCTTCGTCGC CGCGATGATC AACAAGCTCA CCGGCATGGG CCTGCTGTCG
CGCATCACCG AGCGCGTGAC CTTCGTGCTC ATTCCGCCGC TGGCGCTGAT CTTCCTCGTG
CTCGGAACCA TCTTCCTCGG CGTGGCCACC CCGACCGAGG GCGGCGCGAT GGGCGCGGTG
GGCGGCATGA TCATGGCGTT CTCGCGCGGC AAGCTCGACA TGGCGCTGCT CAAGCACGGC
CTCGAAGCCA CCGCGCGGCT GTCGTGCTTC GTGCTGTTCA TCCTCATCGG CTCGACGATC
TTCAGCTTCA CCTTCACCGC GGTCGATGGT CCGATCTGGG TCGAGCACCT GTTCGACAAG
CTGCCCGGCG GCGAGATCGG CTTCCTGGTG TTCGTGAACA CGGTGATCTT CTTCCTCGGC
TTCTTCATCG ACTTCTTCGA GATCGCCTTC ATCCTGATCC CGCTGCTGGC GCCGGTCGCC
GACAAGCTGG GCATCGACCT GGTGTGGTTC GGCGTGCTGC TGGCGATGAA CCTGCAGACC
TCCTTCCTGA CCCCGCCCTT CGGCTTCGCG CTGTTCTATC TGCGCAGCGT GGCGCCGGCG
AAGGACTACC TCGACCGCGT GACGAAGAAG CGCGTGGCCG GCGTCAAGAC GATGGACATC
TACGCCGGCT CGATCCCCTT CGTGCTGATG CAGATCGTCA TGGTGGTGGC CTTGATCGCG
TTCCCGGGCC TGGTGACCTT CACGCTGGAC AAGAAGATGG AGGTCGACCT CGACACCATC
GAGATCAAGG TCGACGGTGG CGGCGACGGT GGCGGCTGGG GCGCGCAGCA GTCCGACAGC
TGGGGTGGCG GGGCATCGCC TGCGGAACCC CCCGGCAGCG CAGCGCCGGA GGGCAGCGGC
ACGCCCCCTT CAGGAGAGCC CGCAGCGGCC GCAGGCAACG AGGGCTACGG CACGCAGCAG
CGCGGCTGGT AA
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| Protein sequence | MIELFTAHAP ELMFGSLLLF LLTGFPVAFA LAACGLLFGF IGVEIGLLSP SIFQALPLRV
FGIIQNDTLL AIPFFTLMGL VLERSGMAEE LLDTVGQVFG PIRGGLALAV IFVGALLAAT
TGVVAAAVIS MGLISLPIML RYGYSPAIAS GAITASGTLA QIVPPSLVLI VIADQLGRSV
GDLYKGAFIP AFMLIGLYVL FIIGLAIFKP AMVPALPPEA RTYREPDGSS GMRSLGVFTV
FVTVVAVTFG MYYGEILSAL KGAEVKPAMD ETIVVALTGG TLFAFVAAMI NKLTGMGLLS
RITERVTFVL IPPLALIFLV LGTIFLGVAT PTEGGAMGAV GGMIMAFSRG KLDMALLKHG
LEATARLSCF VLFILIGSTI FSFTFTAVDG PIWVEHLFDK LPGGEIGFLV FVNTVIFFLG
FFIDFFEIAF ILIPLLAPVA DKLGIDLVWF GVLLAMNLQT SFLTPPFGFA LFYLRSVAPA
KDYLDRVTKK RVAGVKTMDI YAGSIPFVLM QIVMVVALIA FPGLVTFTLD KKMEVDLDTI
EIKVDGGGDG GGWGAQQSDS WGGGASPAEP PGSAAPEGSG TPPSGEPAAA AGNEGYGTQQ
RGW
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