| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1549 |
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| Symbol | |
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| ID | 7083631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 1724993 |
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| End bp | 1726090 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643698566 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_002355203 |
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| Protein GI | 217969969 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTTT CGGCGGCTGA CCACGCCGCC ATGGCGCGCG CGCTGCAGCT CGCCGCCCGC
GGCCTCGACA CCACCTCGCC CAACCCGCGC GTGGGCTGTG TGATCGTGCG CGACGGCACG
ACCGTCGGCG AGGGCTGGCA CGCGCGCGCC GGCGAGGCCC ACGCCGAAGT CCACGCGCTG
CGCCAGGCCG GAGCGGCTGC GCGCGGTGCC ACCGCCTACG TCACTCTGGA GCCGTGCTCG
CACTTCGGCC GCACCCCACC CTGCGCCGAC GCGCTGATCG AGGCCGGCGT GGCGCGCGTG
ATCGCCGCCA TGGAAGACCC CAACCCGCTC GTCGCCGGGC GCGGTCTCGC CCGCCTGCGC
GCTTCCGGCA TCGCCGCCGC GCACGGCCTG CTCGCCGAGG CGGCGCAAGA GCTCAACATC
GGCTTCGTTT CACGCATGAC GCGCGGTCGG CCCTGGGTGC GGCTCAAGGT CGCCGGCACG
CTCGACGGCA AGAGCGCGCT CGACAACGGC GTCAGCCAGT GGATCACCGG CCCGGCCGCA
CGCCGCGACG GCCACCGCTG GCGCGCGCGC GCATGCGCGA TCCTGACCGG CATCGGCACG
GTGCGCGAGG ACGATCCGCA ACTCGGCGTG CGCGACGTGC CCTGCGAACG CCAGCCGCTG
CGCATCCTGG TCGATGCGCG CCTGGAGGTG TCGCCGCAGG CCCGCATCCT GCAGGGCGAA
CCCATCCTGA TCGCCACCGG CAGCACGGAT CAAGCCCGCA TCGACATGCT GCGCGCGGCC
GGCCACGAGA TCGTCTTCGT GCCCAACGCG GCCGGCAAGG TGGATCTGGG TGCGCTGCTG
CGCCTGCTGG GCGAGCGCGG CATCAACGAG CTGCACGTCG AGGCCGGCTT CAAGCTCAAC
GGCTCGCTGC TGCGCGAGGG CTGCGTGGAC GAGCTGCTGA TCTACCTGGC GCCGATGCTG
GTCGGCGACG CCGCGCAGGG GCTCTTCAAC CTGCCCGCGC TCACCCGCCT GGAAGGCGCC
ACAAGGCTGG ACATCCGCGA CCTGCGCCGC ATCGGCCCCG ACCTGCGCCT GATCGCGCGA
CCGCTAGCGC AGGGCTGA
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| Protein sequence | MTFSAADHAA MARALQLAAR GLDTTSPNPR VGCVIVRDGT TVGEGWHARA GEAHAEVHAL
RQAGAAARGA TAYVTLEPCS HFGRTPPCAD ALIEAGVARV IAAMEDPNPL VAGRGLARLR
ASGIAAAHGL LAEAAQELNI GFVSRMTRGR PWVRLKVAGT LDGKSALDNG VSQWITGPAA
RRDGHRWRAR ACAILTGIGT VREDDPQLGV RDVPCERQPL RILVDARLEV SPQARILQGE
PILIATGSTD QARIDMLRAA GHEIVFVPNA AGKVDLGALL RLLGERGINE LHVEAGFKLN
GSLLREGCVD ELLIYLAPML VGDAAQGLFN LPALTRLEGA TRLDIRDLRR IGPDLRLIAR
PLAQG
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