Gene Tmz1t_1546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1546 
Symbol 
ID7083628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1722289 
End bp1723740 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content69% 
IMG OID643698563 
Productcarboxyl-terminal protease 
Protein accessionYP_002355200 
Protein GI217969966 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0793] Periplasmic protease 
TIGRFAM ID[TIGR00225] C-terminal peptidase (prc) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0199003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAGCA GCAAGCTGAA ACAGTTCGGC CTCGTCATGA CCGGCATGGT GGCCGGGATC 
ATGATCAGCC TCAATTTCTC CGCCAACGCC GACCGCAGCG CGCCCCTGCC GCTGCCGGTC
GACGAGTTGC GCGCCTATGC CGACGTCTTC AACGCGATCA AGCAAGGCTA CGTCGAGCCG
GTGGAGGACA AGAAGCTGAT CACCGACTCG ATCAGCGGCA TGCTCTCCGG GCTGGATCCG
CACTCCGCCT ATCTCGACGC CGAGGCCTTC AAGGACCTCC AGGTCGGCAC CCAGGGCGAA
TTCGGCGGTC TCGGCATCGA GGTCGGCATG GAAGACGGCT TCGTCAAGGT GATCTCGCCG
ATCGAGGATA CTCCGGCCTT CCGCGCCGGT GTGCTGGCGG GCGACCTGAT CGTCAAGCTG
GACGACACCC CGGTCAAGGG CATGAGCCTC AACGACGCGG TCAAGCGCAT GCGCGGCAAG
CCGCGCACCG ACATCATCCT CACGATCATG CGCAAGGGGC AGTCGCAGCC GATCGTGATC
AAGCTGACGC GCGAAGTCAT CAAGGTGCAG AGCGTCAAGT CCAAGGTGGT GGAGCCCGGC
TACGCCTACC TGCGCATCGC GCAGTTCCAG GAGAACACCG CCGCGTCGGT GGTCGAGCAC
CTGGCCAAGC TCGGCGCTCA GGGCCCGGTG CAGGGCCTGG TACTCGACCT GCGCAACGAC
CCTGGCGGCC TGCTGCACGG CGCCGTGGGC GTGTCGGCGG CCTTCCTGCC CGAAGAGACC
CTCGTGGTGA GCACCGACGG CCGCACCGAG GACGCCAAGC GCGAGTACCG CGCCATCCAG
GCCGACTACC TGCGCGGCAC CCGCGACGAC TTCCTGCGCC GCCTGCCGGC CTATGCGCGC
GACGTGCCGA TGGTGGTGCT GGTGAACGCG GGCTCGGCCT CGGCCTCGGA GATCGTCGCC
GGCGCGCTGC AGGATCACAA GCGCGCCAGG GTGATCGGCA CGCAGACCTT CGGCAAGGGC
TCGGTGCAGA CCATCCTGCC GCTCAACAAC AACACCGCGA TCAAGCTCAC CACCGCACGC
TACTACACGC CGAGCGGGCG CTCGATCCAG GCCAAGGGCA TCGCGCCCGA CATCGTCGTC
GAGGAGACCG CCAACGGGTC CGGCCGCCGC GTGCGCGAGG CCGATCTGCT GGGGCATCTC
GAGAACGACA AGGGCGCCGT GGAGGCCGCG AAGGCCGCTG CCGGCAAGGC GGACGGCGCG
CCGGCAGAAG AAACCGCGGC CGAGACCGCG CGCTTCGAGC TCGCGGGCGA CAACGACCAC
CAGCTCAAGC AGGCGATCCG CCTGCTCAAG GGCGAGGACA TCGCCCACGC CGCGCCGGCC
GTCGAGGCCG AAGCGGCCGG GGGACAGGCC GCGGCGGCCG GGGCCGCGCA GCCTGCGGCG
GCGAAACAGT AA
 
Protein sequence
MRSSKLKQFG LVMTGMVAGI MISLNFSANA DRSAPLPLPV DELRAYADVF NAIKQGYVEP 
VEDKKLITDS ISGMLSGLDP HSAYLDAEAF KDLQVGTQGE FGGLGIEVGM EDGFVKVISP
IEDTPAFRAG VLAGDLIVKL DDTPVKGMSL NDAVKRMRGK PRTDIILTIM RKGQSQPIVI
KLTREVIKVQ SVKSKVVEPG YAYLRIAQFQ ENTAASVVEH LAKLGAQGPV QGLVLDLRND
PGGLLHGAVG VSAAFLPEET LVVSTDGRTE DAKREYRAIQ ADYLRGTRDD FLRRLPAYAR
DVPMVVLVNA GSASASEIVA GALQDHKRAR VIGTQTFGKG SVQTILPLNN NTAIKLTTAR
YYTPSGRSIQ AKGIAPDIVV EETANGSGRR VREADLLGHL ENDKGAVEAA KAAAGKADGA
PAEETAAETA RFELAGDNDH QLKQAIRLLK GEDIAHAAPA VEAEAAGGQA AAAGAAQPAA
AKQ