Gene Tmz1t_1537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1537 
Symbol 
ID7083619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand+ 
Start bp1716132 
End bp1716818 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content74% 
IMG OID643698554 
Productputative competence protein F 
Protein accessionYP_002355191 
Protein GI217969957 
COG category[R] General function prediction only 
COG ID[COG1040] Predicted amidophosphoribosyltransferases 
TIGRFAM ID[TIGR00201] comF family protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGTGC TCGCGCCGCA GGACTGCTTC GTCTGCGGTG CGACGAGCGG CGGCGAGGCC 
GTCTGTGCCG CCTGTGCCGA CGAGCTGCCG CGGCGTCCTT CCACCGCGTG CCCGCAATGC 
GGCCTGCCCG GCCTGGATGG TGGCCGTTGC GGCGCCTGCC GGCGCAGCGC GCCGGCCTTC 
GATGCGACGC GGGCGGTGTT CGATTTCGCC TTCCCGGTCG ACGCGATGAT CCATGCCCTC 
AAGTACCGCC ACCAGCTCGC GGTGGGCCGT TACCTTGGCG ATGCGTTGGC CCGATGCGGC 
GCCGATTTCG CTGCGGAAGA CGGCGCGGGG GCCGATCTCG TGCTGCCGAT GCCGCTGCAT 
CCGCGCAGGC TCGCCGAGCG CGGCTTCAAC CAGGCGGTGG AGCTGGCGCG CGGATTCGCG 
CGTGCGCGCG ACCTGCCGCT CGGGCTCGCC GTCGTGCGCA AGCTGCGCGA CCTGCCGGCG 
CAGGCCGGGC TCGACCGCGA GGCCCGCCTG CGCAGCCCGC GCGGCGCCTT CGAGTGCGTG 
GAGGACCTGA GCGGGCGCAG GGTGATCGTG GTCGACGACG TGATGACCAC CGGCGCCACG 
CTCGACGAGC TTGCGCGCTG CCTCAAGGGG CGAGGGGCGA GCTGGGTCGG CAACCTGGTC 
GTGGCGCGCA CGCCTTCGCC CTCTTGA
 
Protein sequence
MDVLAPQDCF VCGATSGGEA VCAACADELP RRPSTACPQC GLPGLDGGRC GACRRSAPAF 
DATRAVFDFA FPVDAMIHAL KYRHQLAVGR YLGDALARCG ADFAAEDGAG ADLVLPMPLH 
PRRLAERGFN QAVELARGFA RARDLPLGLA VVRKLRDLPA QAGLDREARL RSPRGAFECV 
EDLSGRRVIV VDDVMTTGAT LDELARCLKG RGASWVGNLV VARTPSPS