| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1534 |
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| Symbol | |
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| ID | 7083616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 1713378 |
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| End bp | 1714028 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643698551 |
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| Product | pyrimidine 5'-nucleotidase |
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| Protein accession | YP_002355188 |
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| Protein GI | 217969954 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.78669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTCCC GTCCCGTCTG GCTGTTCGAC CTCGACAACA CCCTGCACAA CGCCAGTCCG
CACATCTTCC CGCACATCAA CCGCAGCATG ACGCGCTACC TCGAGCAGCA CCTCGGGCTC
GCCCTCGACG AGGCCAACGC GCTGCGCATG CAGTACTGGC ACCGCTACGG AGCCACCATG
CTCGGCCTGA TGCGCCACCA CGGCACCGAC CCCGACCACT TCCTCGTCGA GACCCACCGC
TTCGACCGCC TGCACGAGAT GATGGTGTTC GAGCGCGCGC TGCGCGGCAT GCTGCGCGCC
CTGCCGGGGC GGCGCATCGT GTTCTCCAAC GCACCGCGCC ATTACGCCGA GGCTGTGCTG
GAGATCATGG GCGTGCGCCG CCTGTTCGAG GACGTGGTCG GCATCGAGGA TCTCGACTAC
CACCCCAAGC CCGGCATCCG CGCCTACCGC GGCCTGCTCC AGCGCCGGCG CCTGAACGCC
GCGCAATGCA TCATGCTGGA AGATTCGGCC GTCAACCTGC GCACCGCCAA GCGCCTCGGC
ATGCGTACCG TGCTGGTGGG CGGCGGGCTG CGCACGCCGG CCTACGTGGA CCTGCGCATC
CCCAACATCC TCGCGCTGCG CCGCCAGCTC GGGCGGCTGC AGGTGCGCTG A
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| Protein sequence | MSSRPVWLFD LDNTLHNASP HIFPHINRSM TRYLEQHLGL ALDEANALRM QYWHRYGATM
LGLMRHHGTD PDHFLVETHR FDRLHEMMVF ERALRGMLRA LPGRRIVFSN APRHYAEAVL
EIMGVRRLFE DVVGIEDLDY HPKPGIRAYR GLLQRRRLNA AQCIMLEDSA VNLRTAKRLG
MRTVLVGGGL RTPAYVDLRI PNILALRRQL GRLQVR
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